| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0262 |
|---|
| Symbol | |
|---|
| ID | 3722793 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 326965 |
|---|
| End bp | 327969 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637749843 |
|---|
| Product | NADH:ubiquinone oxidoreductase, RnfD subunit-like |
|---|
| Protein accession | YP_355693 |
|---|
| Protein GI | 77917878 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD |
|---|
| TIGRFAM ID | [TIGR01946] electron transport complex, RnfABCDGE type, D subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 71 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCATT CCAAGCCACT GCTGAGCGTA TCCTGTTCCC CGCACCTGCA CTGCGGCATG
ACCACCCGCG GCATGATGGG CGCCGTGATA CTGGCCCTGC TGCCGGCGGC GGTTGTCGCC
GTCTACCTGT TCGGGCTGGC CGCTGTAGCC GTCATGACGA TCTGTGTTGC CTCCGCCGTG
GCCGTGGAAG CACTGTGGCA GAAAGCCGTC GGCAGTCCGG TCACCGTTAG CGATGGCAGC
GCCGTACTGA CCGGCTTGCT GGTGGCCTTC AATCTGCCGC CGTCGAGCCC CTGGTGGCTG
GCTCTGCTCG GTTCGGTTAT CGCCATCGTG ATCGGCAAGC AGGTCTTTGG CGGGCTGGGG
CATAATCCGT TCAATCCGGC ACTGGTGGCC CGTATCGTGC TGCTGGTGTC TTTTCCCACG
GTCATGACCC ATTGGTCGGG GCCGCAACCC GGGCGGTTTT TGGCCGATGC GGTAACGGCA
GCGACACCCT TGAGCGAAAC CAAAAGCGCC GTGATGCTCA GCGGCCATCT GCCGCCGAAT
GCGACCGGTT TTGCTCTTGA TTATCTGCTC GGCAACATGG CCGGCTGCCT GGGCGAGGTC
TCGGCCCTGG CGCTGTTAAT CGGCGCTCTG TTCCTGCTCT GGCGACGGGT CATCAGCTGG
CATATTCCGG TCAGTTACAT CGGCACGGTG GCGACAGTCT CCGGCATGTT CTGGCTTGTC
GATCCGAGCC GCTACCCCCA TCCGGTTTTT CACCTGCTGT CCGGCGGCCT GATGCTGGGG
GCTTTTTATA TGGCCACCGA CCTGGTCACC TCGCCGTTGA CAGGGCGCAG CATGCTGCTG
TACGGCTGCG GTTGCGGACT GTTTACCGTG CTTATCCGCC TGTTTGGCAG TTATCCCGAG
GGGGTGGCGT TTTCCATCCT GCTCATGAAT ACGGTCACCC CGCTGCTGGA CCGCTATCTG
GTACCGCGCC CCTTCGGTAT GGGCAGTTCG CGAGGCATCC TATGA
|
|---|
| Protein sequence | MQHSKPLLSV SCSPHLHCGM TTRGMMGAVI LALLPAAVVA VYLFGLAAVA VMTICVASAV
AVEALWQKAV GSPVTVSDGS AVLTGLLVAF NLPPSSPWWL ALLGSVIAIV IGKQVFGGLG
HNPFNPALVA RIVLLVSFPT VMTHWSGPQP GRFLADAVTA ATPLSETKSA VMLSGHLPPN
ATGFALDYLL GNMAGCLGEV SALALLIGAL FLLWRRVISW HIPVSYIGTV ATVSGMFWLV
DPSRYPHPVF HLLSGGLMLG AFYMATDLVT SPLTGRSMLL YGCGCGLFTV LIRLFGSYPE
GVAFSILLMN TVTPLLDRYL VPRPFGMGSS RGIL
|
|---|
| |