| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0258 |
|---|
| Symbol | |
|---|
| ID | 3722789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 322439 |
|---|
| End bp | 324109 |
|---|
| Gene Length | 1671 bp |
|---|
| Protein Length | 556 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637749839 |
|---|
| Product | two component sensor histidine kinase |
|---|
| Protein accession | YP_355689 |
|---|
| Protein GI | 77917874 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 66 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGATA AAAAGACGCT TATTGAGAAC CTCACGGGGG TCAACTCTTC CAAGCTGAAC
TATTACGTTG AGCTCAAAAA GCGTAATGCC GAAATTCTCA AGCAAAACAG CCGCCTGGAG
ATCCTGCATC AGCTTTCCAG AGACATCAAT CTGGAAATGT CCACGGAGGA TATGATCGAG
CGGGCATACC GGCAACTGCA CCGGGCTTTG CCGTGCGATT TTCTGGCCCT TGCCATGTTG
CGCGAAGGCG CCCTGACCAT GCGCGCCGTA ATGCCCAGCA AGCCTCCTCG GTCGGCAAGC
ATACCGGGCG ATTCGTTTGT CTGGGATGTC GTCAGATCCG GCCAGGCCTG TGTGCATGAG
CCGGTCAACA CCGCGGATGC CTTCTTTCAG GAATATCCCG AACTGGCCTG CGACCTGCAG
TCCATGGCCA TCGCCCCCTT GTACAAGCGG GCAGCCGTCC ATGGCCTGTT GCTGGTAGGG
AGCGCCCAGG GCCAGGCGTA TGCCAGGGAA GAACTCGGCT TTCTCCAGCA CCTGGCCGAT
CATCTGACCA TCAGCATTCA GAATTCCCGC CTCTACAAGG AGGTTTCCAG GGCCCAGCAA
GGTTGGGAAT CCACATTCAA GGCCGTTACC GATCCCATTT TGCTGCTCGA TCCGGATTAC
AATATTCTGC TCGACAACGG CCGGCAGATG CCGGAAATGA CCTGCGAGCA GGGCGCCTAC
CAGGGCATGA AATGTTACCG GCGTCTTTAC GGTCGCGACA TCCCCTGTGA GGAATGCCCC
ATGGAAAGCC TCAAAAAGGA TCCGAAACCG GTATTCAAGA GGCTCGAAAC GGACTCGGGG
CAGGTGCTGG ACCTTTTCTA TTACCCGGTG CTGGACGAAA ATCGCCAGTT GACCGCCATT
ACTCATATCA TTAAAGATGT AACGCAGAAG ACCAATATGG AAGCCAGGCT TATGCATTCG
GCTCGATTGG CGGCCATTGG TGAAATGGCT GCCGGCGTGG CGCATGAGCT GAACAGCCCC
ATGACGGTCA TCATCGGTAC GGCACAGCTG ATTCATCGCG AGTTCGAAGC GCAGCCCGAG
GTTCGCGAAC CGCTCGAAGA TATCGTCAAC TGCGGTCTGC GCTGCAAACG CATTATCCAG
AATCTGTTGA CCTTCTCCCG CCAGGACCAC CTGCCCATGG CAGAGACCGA TCTTAACGAA
GAGGTTGAGC GGGTTCTGCA TCTGATTTAT TATCAGATCG ATCGTAACCA GATTACCATT
GTCAAGAACC TCGACCCCAA TTTGCCGTTG ACCAAGGCGA ACGGCCGCCA GATTCAGCAG
GTTCTGACCA ATCTGCTGAT TAACGCCAGG GACGCCCTGG GGGGTGTTGA CCGGGAAAAG
ACCATTGAGG TACGTTCCTA TGCGGAGGAT AATGGCGATG GACAGTGGAT CATTATTTCT
GTAAAAGATA ACGGCATAGG TATTCCGGCC AAAAATCTTC AGCGTGTTTT TACCCCTTTT
TATACCAGTA AAGAGGAAAC CAAGGGCACC GGACTGGGGC TTTCCGTCAG TCTCGGCATT
GCCGAAGCCC ATGGGGGCTC TCTGGAGGTG GAAAGTACCT GGGGAGAAGG CAGTTGTTTC
ACGTTGCGGT TGCCGATCAG AAAAGGCCCC GCATACGACC TCAATTTTTA A
|
|---|
| Protein sequence | MLDKKTLIEN LTGVNSSKLN YYVELKKRNA EILKQNSRLE ILHQLSRDIN LEMSTEDMIE
RAYRQLHRAL PCDFLALAML REGALTMRAV MPSKPPRSAS IPGDSFVWDV VRSGQACVHE
PVNTADAFFQ EYPELACDLQ SMAIAPLYKR AAVHGLLLVG SAQGQAYARE ELGFLQHLAD
HLTISIQNSR LYKEVSRAQQ GWESTFKAVT DPILLLDPDY NILLDNGRQM PEMTCEQGAY
QGMKCYRRLY GRDIPCEECP MESLKKDPKP VFKRLETDSG QVLDLFYYPV LDENRQLTAI
THIIKDVTQK TNMEARLMHS ARLAAIGEMA AGVAHELNSP MTVIIGTAQL IHREFEAQPE
VREPLEDIVN CGLRCKRIIQ NLLTFSRQDH LPMAETDLNE EVERVLHLIY YQIDRNQITI
VKNLDPNLPL TKANGRQIQQ VLTNLLINAR DALGGVDREK TIEVRSYAED NGDGQWIIIS
VKDNGIGIPA KNLQRVFTPF YTSKEETKGT GLGLSVSLGI AEAHGGSLEV ESTWGEGSCF
TLRLPIRKGP AYDLNF
|
|---|
| |