| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0206 |
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| Symbol | nuoCD |
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| ID | 3723025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 263861 |
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| End bp | 266245 |
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| Gene Length | 2385 bp |
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| Protein Length | 794 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637749787 |
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| Product | trifunctional NADH dehydrogenase I subunit B/C/D |
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| Protein accession | YP_355637 |
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| Protein GI | 77917822 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases
[COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7
[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
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| TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit
[TIGR01961] NADH (or F420H2) dehydrogenase, subunit C
[TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00000609108 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAT CGATTCCTAA AAATATCATT CTTACGACCC TGGACGATGC CATCAACTGG
GGACGAAAAA ACAGCATGTG GCCCATGTTT TTCGGTCTGT CCTGTTGTTT TGTCGAGATG
ATGGGCAGCA TGACGCCACG CTTCGACCTG GCGCGCTTCG GCGCCGAAGT GTTGCGCGGT
ACGCCGCGCG AGGCCGACCT GATGGTTATC GCCGGTACGC CGTTTAAAAA AATGGCGGCC
AGCATGCTGC GTGTCTACGA GGAAATGGCC AACCCCAAGT GGGTGATCGC CATGGGCAGT
TGCGCCAATT CCGGCGGCAT GTACGATGTT TACAGCGTCA TGCAGGGGGT TAACCAGGTG
CTCCCGGTGG ATGTCTATAT TCCCGGTTGC CCGCCGCGCC CGGAGGCTTT CATGCAGGGC
CTGATGACGC TGCAGGAGAA GATTGCGCGG AAAGAGAGCC CCGCCAGGCC GGTGCTGAAT
CTGCGCGGTG GGAATGAGGG TACCACGGTA CCGATCCTTA TCGACGGTTC CAGTAAAACC
CGGGATACCC GCGGGCCCGG ATACGGCCAT TGCCCTATTC GCGGAACGGC TCAGCAGCAT
CCCGACTTCA AGGGCCATCG CGCTGCCGGC ATGTGGGGCC CGCCCCAGCC GAAAATCGCT
TTCTCCGCGT CAACCGCACC GCTGCTGGAG CAGCTTCGGG AACGTTTCGG CGATGACGTT
CGGCAGGAGG AAGGTGCCGA TATGCCGACG TTGGTGGCTG ACCCCGCCCA GGTGCCGGAG
TTGTTGCGGT TTCTCAAGCA GGACATCGAT CAGCCGTATG AGCGCCTCGA GGATCTGACG
GCCATCGACG AAACGGCACG CAGCCAGCGG CCCGCTCATG ATCTGACGAT GGTCTATCAC
CTGCTGTCGT TTGAGCGGGC AGGTTATCTG CGGGTCAAGG CGCCTTTGAG GAACGACCGG
GCCGAAGTTC CCTCTATCAC CGGGCTGTGG CCGGCAGCCA ACTGGTACGA GCGCGAGGCC
TTCGATATGT TCGGTGTTCG GTTCGCCGGT CATCCGGACC TGCGGCGGAT TCTTATGCCG
GAAGGCTGGC AGGGGCACCC GCTGCGCAAG TCTCATCCGA GCCGCGCCAC CGATATGCCG
CCATTTACCC GTGATACGGC CACGACCATG GTGCCGCCGG AGGGTTCCCA TTTCTTCAGT
AACCGGGCCC CGGTCGACAA TCAGTCGCTG TCCATCCTCA ATCTGGGGCC CCAACACCCG
GGGACGCATG GCATACTGCG GGTGATTCTG CAGCTGGCCG GCGAAGAGAT CGTCGATCTC
GATTCGGAAA TCGGCTACCA TCACCGGGGC GCGGAGAAGA TTGCCGAGCG CCAGCATTGG
AACCAGTACA TCCCTTATAC CGATCGTATC GATTATCTGG CCGGATCGTT GAACAATCTG
GCCTATCTGT ATTCCGTGGA AACGCTGTGC GGGGTCGAAG TACCGCCGCG GGCCCGTTAT
ATCCGCGTCC TGCTCAGCGA ACTGTTCCGT ATCGCCAGCC ACCTGGTATG GCTGGGAACT
TTTGCCCACG ATGTCGGCGC CATGACGCCG GTGTTCTACG CCTTCGACAG CCGCGAGAAG
ATTTTTGACA TCATCGAGCT GATCACGGGT GGGCGCATGC ATCCCGCCTG GTTCCGTATC
GGTGGCGTGC CCGACGATCT GCCCGATGGC TGGCTGGCGG CGGTCGAAGC TTTTACCAGA
GATTTCGAAG CTCGCATCGA CGAGTTTGAC CGTTTGCTCA CCGGCGGCCC CATTTTCCGC
GCACGCACCG AAGGTATCGG AACCGTCAGC CGGCAGCAGG CCGTTGAGCT GGGTTTCAGC
GGTCCCAACC TGCGCGCCAC CGGGCTGGCC TGGGACCTGC GCAAAAGCAT GCCGTATGGC
GGTTACGACG AGTTTGACTT CGATGTGGTT ACGGCCGGGG GAGGAGACTG TTTCGCCCGC
TACCTGGTGC GTCTCGGAGA GTTGCGTCAG AGTTTGCGTA TTGTGCGCCA GGCTGCCGAG
GGTATGCCGC AAGGGCGCTG GATAAGCGAC CAATATCGGT ATGCTTATCC CAAACGGGAG
GATGGTCTGC AGGATATCGA AAGTCTTATT CATCACTTTC TGCATGTCAG TCGTGGCCCT
GCGGCGCCCC GCGGCGAATG TTATCGGGCC ATTGAATCGA GCAAAGGTGA ATGCGGCTAC
TACGCCGTCA GCGATGGCGG TACCGGGGCC TATCGTCTGC GCATCCGCAC GCCGAGTTTT
CCCCACCTGC AGGCCTTGCC GCAGTTGAGT CGCGGCCGGT TGGTGGCTGA TGTTATCACT
ATCCTCGGCT CGCTCGACTA TGTGCTTGCC GACCTGGACC GCTGA
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| Protein sequence | MSESIPKNII LTTLDDAINW GRKNSMWPMF FGLSCCFVEM MGSMTPRFDL ARFGAEVLRG
TPREADLMVI AGTPFKKMAA SMLRVYEEMA NPKWVIAMGS CANSGGMYDV YSVMQGVNQV
LPVDVYIPGC PPRPEAFMQG LMTLQEKIAR KESPARPVLN LRGGNEGTTV PILIDGSSKT
RDTRGPGYGH CPIRGTAQQH PDFKGHRAAG MWGPPQPKIA FSASTAPLLE QLRERFGDDV
RQEEGADMPT LVADPAQVPE LLRFLKQDID QPYERLEDLT AIDETARSQR PAHDLTMVYH
LLSFERAGYL RVKAPLRNDR AEVPSITGLW PAANWYEREA FDMFGVRFAG HPDLRRILMP
EGWQGHPLRK SHPSRATDMP PFTRDTATTM VPPEGSHFFS NRAPVDNQSL SILNLGPQHP
GTHGILRVIL QLAGEEIVDL DSEIGYHHRG AEKIAERQHW NQYIPYTDRI DYLAGSLNNL
AYLYSVETLC GVEVPPRARY IRVLLSELFR IASHLVWLGT FAHDVGAMTP VFYAFDSREK
IFDIIELITG GRMHPAWFRI GGVPDDLPDG WLAAVEAFTR DFEARIDEFD RLLTGGPIFR
ARTEGIGTVS RQQAVELGFS GPNLRATGLA WDLRKSMPYG GYDEFDFDVV TAGGGDCFAR
YLVRLGELRQ SLRIVRQAAE GMPQGRWISD QYRYAYPKRE DGLQDIESLI HHFLHVSRGP
AAPRGECYRA IESSKGECGY YAVSDGGTGA YRLRIRTPSF PHLQALPQLS RGRLVADVIT
ILGSLDYVLA DLDR
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