Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_0108 |
Symbol | grpE |
ID | 3722903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 131449 |
End bp | 132045 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637749687 |
Product | heat shock protein nucleotide exchange factor GrpE |
Protein accession | YP_355541 |
Protein GI | 77917726 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.000378149 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCAGAAC AGAAAGAACA GGCAACCGAT GTGAAGCAGG GCCTGGAAGA AGAGCAGCCG GCCGCCGAAA CACCGGAAGA GGTTGCAGCA GAAACAGAAG AAGAGACGGA CCCCGTTGCG GCCCTGGAGC AGGAGCTTGC TGCCGCGCAG GAAGAAAAAC AGAAAAACTG GGATCTGTAC CTGCGCGAGC GTGCCGAACT GGAAAATTTC CGCAAACGCA TGCAGCGGGA AAAGGAAGAT CTGGTCCGCT TTGCCAACGA GAATCTGCTG CGCGAGATCC TGACCGTGGT GGACAATCTC GAACGCGCCA TCGAACACGC ACGCCAGACG GACGAAACGG TCAAAGGCCT GCTCGAAGGG GTCGAAATGA CCCTCTCCCA GTGCCAGAAA CTGCTGGAAA AGTTCGGCGT GACTCCGGTG GTGGCCGTGG GCGAACCCTT CGACCCCACC TGGCATGAAG CCATGGGCCA GATGGAAAGC GCCGAGCATC CGCCCAACAC CGTCATGCAG GAAATGCAAA AAGGTTACGT ACTCAACGAT CGTTTGCTGC GCCCGGCGAT GGTGATGATT TCCAAAGCCC CCGCAGCTAC TGAATAA
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Protein sequence | MAEQKEQATD VKQGLEEEQP AAETPEEVAA ETEEETDPVA ALEQELAAAQ EEKQKNWDLY LRERAELENF RKRMQREKED LVRFANENLL REILTVVDNL ERAIEHARQT DETVKGLLEG VEMTLSQCQK LLEKFGVTPV VAVGEPFDPT WHEAMGQMES AEHPPNTVMQ EMQKGYVLND RLLRPAMVMI SKAPAATE
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