Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_0072 |
Symbol | |
ID | 3722867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 87863 |
End bp | 88540 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637749651 |
Product | outer membrane immunogenic protein |
Protein accession | YP_355505 |
Protein GI | 77917690 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3637] Opacity protein and related surface antigens |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 4.17135e-22 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTACGCT TGCGCACTAT TTTTGGGGCT TTGGTTGTAG CCGTCCTGAT GAGCGGGCCG GTATATGCTG GAAATATGAT GGGGGCCGAA GCATTGTCTG ATTATTCCGG CCCGTACATC GGTGGCTTTG TGGGCCACTC ATGGGCCGAC TTGGAATATA GTGACTCGTG GAATCCCGGG TATGATCTTA ATGCGGATAT TGAGGGATTT GTCGGTGGAC TTTACTTCGG CCATAACTAT ATGATCGATA ACATTATGTT AGGCTTTGAA GCTGATGCCG GCATTGGTGA CCTGGGTGAA GGTGCCGACA AAAATAACTC CTACAATGAT TGGTCGGCCT TTGACATTGA CTGGGATGCG CATCTTCGAG CACGCGCAGG CTTTGTCTAC AACACCACGC TGTTCTATGT TGCCGGTGGT CTGGCCGTTG CGAAGGTTGC CGTTGATGAT ACGGATTCAG GGTATGGCGG AGACAATGCT ACACATTTCG GCTGGACGAT TGGCGCTGGC ATTGAGCAAA AAATCACCGA GCACCTGACT GCACGGATTG AATATCTTTA TGACGACTAC GGTAGCGAGA GTTACTCGAT TGAAGATTCG TGGTGGGGGG ATACATACTC GGCAGATATC GATTTGGAGA TTCATACCGC CCGCCTTGGT CTGGCTTATT CATTTTAA
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Protein sequence | MLRLRTIFGA LVVAVLMSGP VYAGNMMGAE ALSDYSGPYI GGFVGHSWAD LEYSDSWNPG YDLNADIEGF VGGLYFGHNY MIDNIMLGFE ADAGIGDLGE GADKNNSYND WSAFDIDWDA HLRARAGFVY NTTLFYVAGG LAVAKVAVDD TDSGYGGDNA THFGWTIGAG IEQKITEHLT ARIEYLYDDY GSESYSIEDS WWGDTYSADI DLEIHTARLG LAYSF
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