Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_0046 |
Symbol | |
ID | 3723165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 53028 |
End bp | 56228 |
Gene Length | 3201 bp |
Protein Length | 1066 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637749625 |
Product | putative serine protease |
Protein accession | YP_355479 |
Protein GI | 77917664 |
COG category | [S] Function unknown |
COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000000707412 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTTCA TTCCCCTGCT CTGCCTTCTT CTAGCTTTTG TGTTCTGCAA TTACGCCGGT GGCGCGGACC TGCCCTCCTC CTTTGACCTG CGCAACATCG ACGGACGCAG CTATATTGGG CCGGTGCGCA ACCAGAAAAA GTGTGGCAGT TGCTGGTCCT TCGGCACCCT GGCCGCCGCC GAAAGCACCT GGAACCGGGT CCATGGCCTG TATGACGACC AGGCCATCGA CTTTTCCGAA GCCTTTTTGA CCTGGAGCCT GAGTCCTCTG TACGATGGCC TGCATGGGTG CGATGGCGGC AGTCTGGATC TCCAGCAAAA CACGGCACTG ATCGAGTATG GCGTACCACT TGAATCGGAC TTTCCCTACA CCATGACAGA TCCAGGCAGC GATCTGCACT GGGATGCAAC GCGCTATAGT TTTCTGGACT GGTACCGCAT TCCCCCCAGC GACATCGAAA CCACGCGCCG CATTCTCTAC CACATTGGAG CGGTTACCGC CGGCGTACTG GTCGAAGATG ACTTTTACGC CTACTCCGGC GGCATCTTGA CCAACCAAAA CACCGCCATC AACAATCCCT TGCCTTACGA ATCCTCCGCC AACCACCTTG TTGCCCTGGT GGGCTGGAAC GATGAACCCG GGGACGACGG TCTAGGCTAT TGGATTTTAC GTAACAGCTG GTCTGAAAAC TGGGGGGATA ACGGCTATGT AAACATCCGC TATACCACCG CCAAAGTGGC GCTGCACAGC GCCTATATGA TGTTGGAACC CTGGAGCGGT GCGAATGTCG TCCTGGAAAA TCAAGAAGAC CTGTCGGCTA CTCCCTGGAG TGCCGGCGGT ACACTTAACG CTCACGGCTT GGACCTGTGG GGCGGCGCCG CCAGTAGCGT AACCAACCGG GGAACCATCC TGGCCGAAGC ATACGCTGAA ACCGAACTGG CCACGGCGCG CGGCGTCTAT CTGTGGGGTG GACCCGAAGG CCAGGTGATT AACGAGAAGC TTATAGGAGC TTTGGCCTCC AGCGACAACA ACCAGGCCAG CGCCTATGCC ATCTGCCTGC AGGGCGGTCT TGTGGATAAT AGCGGCCAAC TGCTCGCCCT GGCCACAAGC CATGCCGACC AGGCACTGGC CTTCGGCGTA TGGGCGGCCA ACGGTGGCAA TCCCCTGGAA ATCCGCAACA ACGGACTGGT GCTGGCATGG GCTCAAAACA GCGGCACCAA TGCCGGCTAC GGCATCTGGG CCGACAGTCG CTACCTGACC GAAGTCACCA ACAGCGGCAG TATCTTCGCC TTTGCCGACA CTTACGCTGT CGGTGTGCTG TTGAGCGGAG GTCCTGCTGT ACTGAACAAC AGCGGCACCA TCCTGGCGGC AGCGTCCCTG GAAGATCCGG ACATATTATC CGGCACCAGT ATCGGCCTGC TGGCTACCAA GAAAACAACG ATTCTCAACA GCGGCACCAT CAGCGGCGCT TATGCCTCCA TAAAATCCGA GGACGACACC TTACTCGTGC TGGAAACCGG ATCCGATCTG ATCGGAACGG CCTATCTCAA AGGAAACAGC GATGTCGTTT GGCTAAACGG CAGCGGCAGT GAAGATACGT CCTTTTACGG TGTGGAAACC CTGCTGATGG CCGGCGACGA CTGGTCCCTG AGCGGCGCCT CAGCCTTCGG CAGCATCGAG GTCGCCCTGG GGCGGCTGGG GGTGGACGGC GCATTGGCGG GTGAGACATC GGTCCTGGCA GAGGGCATCC TCGGCGGCAA CGGTTCGGTA ACCGGCACGG TCGCCAACGG CGGCACGGTC GCGCCGGGCC ATTCCGTCGG CCATCTCACC GTTGTCGGCG ACTACGCGCA GACCGCCGAT GGCACCCTGG AGATCGAAAT CGGCGACGGC ATCGCCGACC TGCTTACCGT CACCGGCACC GCCGATCTGG CCGGCACCCT GCTGATACTG CCCGACGGCT ACGCCACCGG CGGCAGCTAT ACCTTCCTGG AGGCGGGAAC CATCGCCGGC GCCTTCGAAA CACTGACCAG CGCCGCGGTG CTCTCTGTCA CCCTGGACGA TGCCACCCCC GGCAGCCTGA GCCTCGATGT GACGCGCAAC AGCTACACAG CACTGTCCTC GCCGCACAAC CGGGGTCTGG CCAGCACCCT GGACGGTCTG CGGTCCACCG CCGACGGCGA TTTCGGTTCC TTGCTCGACA GCCTCGATCT GGCCCTGAGT CAGTCGGCGC TCAACGACGC CCTCGCCTCT CTGACCCCGC GCATCCACGG TCTGGCCAGC ACCGTGATCC TGAACGATGC GCAAACCCGC CTGGGCGATC TGCGCCGCCG CCTGCAGCGC GTCGATCCGG ACATGCAGCC GGAAGGAAAG CCCTCCGCCT GGTTCGAGAT CCTCGGTGAA GACAACCGCT ACGGCAGCGA TGGCGGGTAT TTCGGCGCAC GGGAAGAACT TTACGGACTG CTGCTGGGGA TGCACCGATC AACCTCCGGT GGCCTGACCC TGGGCGTGGC GGCCGCCGTG TCGGAAAGCC GCCTGGACGG CCGGGACGGC AACGACGACA GCGAAATCAA AAGCCAGCAG GGATACCTTT ACGCGGCCTG GCGCGAGCCG CGCCGCGCCG ACGGCATGCA TATGGAGGCC GTTGTGGGCG GTGGTCTCTG TCAGCTGGAC ACCGATCGCT CCATCCCGTT CGCCGGCCGC AGACCCCACA GCGAGCATGA CGGCAGCCTG ATCGGCGCCA CCTTCAACGG CGGCTATACG CTAGACGTTA ACGGATGGAT CATCGATCCC GGCGCCGGGC TGAGCTTCGT GCATCTGCGC GAAGAGAGCT TTCGCGAATC CGGCGCCAAC AGCGCCGACC TGAAGATCGC GGCGCGCGAC AACGATTCCC TGCAAAGCCA GCTGGGTGTG CGTTTAAGCC ATCCGTTGCG GCTCGACACC CTGACCCTGC AACCGGAACT GCGTATCGAA TGGCAGCACG AATTCAATCG CAAGACCGAA GCGCTGCAGG CCCGCCTGGC CGGCGGCGAC ACGTTTATCA CACCGGGCCG CGACCTGGCC GGCGACGGCC TGCTGCTCGG CGCCTCGCTG CGGGCCCGGA TGTCCGACAA CGTCTTCGGA ATGCTGGACT ACACCTGCGA CCTGCAGAGC CACGGCGCCG CAGGTCACGC CCTGCGTCTG CACCTGGCAG TGATGTTCTG A
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Protein sequence | MRFIPLLCLL LAFVFCNYAG GADLPSSFDL RNIDGRSYIG PVRNQKKCGS CWSFGTLAAA ESTWNRVHGL YDDQAIDFSE AFLTWSLSPL YDGLHGCDGG SLDLQQNTAL IEYGVPLESD FPYTMTDPGS DLHWDATRYS FLDWYRIPPS DIETTRRILY HIGAVTAGVL VEDDFYAYSG GILTNQNTAI NNPLPYESSA NHLVALVGWN DEPGDDGLGY WILRNSWSEN WGDNGYVNIR YTTAKVALHS AYMMLEPWSG ANVVLENQED LSATPWSAGG TLNAHGLDLW GGAASSVTNR GTILAEAYAE TELATARGVY LWGGPEGQVI NEKLIGALAS SDNNQASAYA ICLQGGLVDN SGQLLALATS HADQALAFGV WAANGGNPLE IRNNGLVLAW AQNSGTNAGY GIWADSRYLT EVTNSGSIFA FADTYAVGVL LSGGPAVLNN SGTILAAASL EDPDILSGTS IGLLATKKTT ILNSGTISGA YASIKSEDDT LLVLETGSDL IGTAYLKGNS DVVWLNGSGS EDTSFYGVET LLMAGDDWSL SGASAFGSIE VALGRLGVDG ALAGETSVLA EGILGGNGSV TGTVANGGTV APGHSVGHLT VVGDYAQTAD GTLEIEIGDG IADLLTVTGT ADLAGTLLIL PDGYATGGSY TFLEAGTIAG AFETLTSAAV LSVTLDDATP GSLSLDVTRN SYTALSSPHN RGLASTLDGL RSTADGDFGS LLDSLDLALS QSALNDALAS LTPRIHGLAS TVILNDAQTR LGDLRRRLQR VDPDMQPEGK PSAWFEILGE DNRYGSDGGY FGAREELYGL LLGMHRSTSG GLTLGVAAAV SESRLDGRDG NDDSEIKSQQ GYLYAAWREP RRADGMHMEA VVGGGLCQLD TDRSIPFAGR RPHSEHDGSL IGATFNGGYT LDVNGWIIDP GAGLSFVHLR EESFRESGAN SADLKIAARD NDSLQSQLGV RLSHPLRLDT LTLQPELRIE WQHEFNRKTE ALQARLAGGD TFITPGRDLA GDGLLLGASL RARMSDNVFG MLDYTCDLQS HGAAGHALRL HLAVMF
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