Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_0045 |
Symbol | |
ID | 3723164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 51111 |
End bp | 52847 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637749624 |
Product | hypothetical protein |
Protein accession | YP_355478 |
Protein GI | 77917663 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00000316898 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCTTGCC GCCCGAAGAA AGAGAAACGG TTGAGTCCCC TTCACCCTGA TCACGAGCAC CCTTTACCGA CGGAATTTTC CCGCGGCACA ACGCGGCGAG TACTGCTGAT CGTTGGCGCA CTGCTGACCT TTTATCTGGC CGGGGTCTTC ACCCAAGGCT TCGATCGGGA CGAGTGGCAA ACCATGGTAG CGGCGGCCGG CGTTGCCGAT GGCAGCACCC TCTACACCGA TATCTGGGAC AATCACGGCC CCTTGTTGAC GGTTGTCCTG GGTGGTCTGA TCAAATGGCT CGACACGCAG GATCACATGC TGCTGATGTT TGGCGGGCGC CTGCTGATGC TGGCTATGCT GGTCGTGATC CTGTGGCTGA CCGGCCGACT GGCACGGCGC GCCTGGCCCG ACAGCCCCCT TGCCGCTCCT CTGGCCATGG CGGTGCTGCT CTGCAGTCAG GTGTTTTTCG GAAAAGGCCT GGAAATACGT CCGGATGTGC CACTATTGCT GGCCTGGACC ACAAGTTTGT GGCTGCTGCA GCGCGGCTTC GACCATAACC GCAACCTCGA CTTTTTGCTG GCCGGTACGG TGCTGGGGGT CGGTTTTGCC TTCAGTCTCA AAACCCTGCT GTTGGGAGCG GCGTGCGGCG TAGCCCTACT GGTGGTGGTG ATCCGGCGCC GGCGACTGTA TCCCCTGTGG CTGCTCACTT TTGGCCTGGG GGTGCTCCCT GCTCCCGTGA CCATGTTGCT GTGGCTGCGC CAGGCAGGCT CCCTGCCGGC TTTTCTGGAC AGTTATCTGG GGCAGAACTT CGATCGCATC GCCGAATCGT GGCTGCTGGG ACTCAAAAAA GCCTGGCAGG CAGAGGAGTT GCTGCTGTTG ACGCTGACAG CGGCGGCCTT GTATGCCGTG CGGCGCCTGA AAAAGACATC CCTGCCGGAA GGGATAATCG CTCTGTTGGC CGTTTCGGGC ACCCTGCTGC TTCTGTTTCT GCGGCTCCCC ACCCACTATG AACAGAGTCT GCTGCCGATT TTGCCGGCCG CGGCGGTGAT CATTGCCTGG GCTATCGGTC AATGGTTGCT GCTGGCAAGA AAGACACGCT GGCAGCTGCC CCTGCACAGC GTATTGCTGC TGCTGGCCAT CGCCAGCTGT TTTGACCACG CCTGGTTCCG GCATGACAGC GATGAGGACC TGCGCATTGC CCGGATACGC ACGGAACTGC TGCCTGATGA GGCGCTGCTA TTTGAAGGTG TGGGGCTGCC TCTGTTTCAG CCAAGACCTT TTATCTACAA GGCCTTCGTC AACACCCTGT GCCAACGCAT CCGCGAGGGA CAACTGGACA TCGACCCGGT TCATGAACTG GATCGCAACG ATGTCGGCTA CGCCGCCTGG GACAAACGGG TAGCGAAAAT GGGCGACGAC ATACGGGCTT TTTTGCAGAA CAACTTCCTG CCCCTGCGTG ACGGAGGGCT GCTGGCGGCC GGTACGGTTC TGCCGGCGAC AAGCGAAGGC AAAATCCGCT GGAAGGTCTG CATCGCCGGA CGCTATTTCC TGGAAACCGG CGCCCCGCCC GGCGACCTGC GGGTCGACGG ACTGCCGGTG GGCGACGTCG TTGATCTGAC CGACGGTCCC CACACCTTTG CCTGGACCGG CGACCACGCC GTTGTTCTAA GTATCGCCCC GCCCCGCTAC TGGGCGGCCC GCGATGCCGT TACCGCCTGG AAAACCGGAC CGCTGCCCCG GCCCTAA
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Protein sequence | MPCRPKKEKR LSPLHPDHEH PLPTEFSRGT TRRVLLIVGA LLTFYLAGVF TQGFDRDEWQ TMVAAAGVAD GSTLYTDIWD NHGPLLTVVL GGLIKWLDTQ DHMLLMFGGR LLMLAMLVVI LWLTGRLARR AWPDSPLAAP LAMAVLLCSQ VFFGKGLEIR PDVPLLLAWT TSLWLLQRGF DHNRNLDFLL AGTVLGVGFA FSLKTLLLGA ACGVALLVVV IRRRRLYPLW LLTFGLGVLP APVTMLLWLR QAGSLPAFLD SYLGQNFDRI AESWLLGLKK AWQAEELLLL TLTAAALYAV RRLKKTSLPE GIIALLAVSG TLLLLFLRLP THYEQSLLPI LPAAAVIIAW AIGQWLLLAR KTRWQLPLHS VLLLLAIASC FDHAWFRHDS DEDLRIARIR TELLPDEALL FEGVGLPLFQ PRPFIYKAFV NTLCQRIREG QLDIDPVHEL DRNDVGYAAW DKRVAKMGDD IRAFLQNNFL PLRDGGLLAA GTVLPATSEG KIRWKVCIAG RYFLETGAPP GDLRVDGLPV GDVVDLTDGP HTFAWTGDHA VVLSIAPPRY WAARDAVTAW KTGPLPRP
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