| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_2089 |
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| Symbol | |
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| ID | 4908665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1934715 |
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| End bp | 1936499 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640125842 |
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| Product | V-type ATP synthase subunit A |
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| Protein accession | YP_001056970 |
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| Protein GI | 126460692 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1155] Archaeal/vacuolar-type H+-ATPase subunit A |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGTA GAATAGAGTA TATATCGGGG CCCGTTGTTA AGGCTGAGCT ACCCGGCGCG
AGACTGTACG AGCTGGTCTT TGTGGGAGAG CTAAAGCTCT TTGGAGAAGT GGTTAGAATC
CAGGGAGACA AGGCGTTTAT ACAAGTATAT GAGGACACCA CCGGGCTTAA GCCGGGCGAG
CCTGTGGAGA GAACTGGCGA GCCTCTAAGC GCCTGGCTGG GGCCTACTAT CCTCGGAAGA
ATTTATGACG GTGTCCAGAG GCCGCTTAAG GACATAGAGA GCATCTCTAA GAGCCCGTTT
ATAGCCCGGG GCATCGGCTA CGACAAGGCG CCGCCGCTCG ATTTAAATGC TGTGTTTGAC
TTCAAGCCAG CAGTTAAGCC AGGCGACTTT GTGCAACCCG GCGATGTGTT AGGCTCGGTT
AAGGAAACCG AGCTTATAAC CCACTACATA ACCTATCCCC CTCTGCCAGA GAACGCGCCT
GGCGAAGTGG AGTGGGTCGC CGATGGAAAA TACAAGGTAG ACGACGTAAT TGCCAGGATT
AAGACAAAGC GGGGCGTAGT GGAGGTCAAA ATGTGGCATA AATGGCCCGT GAGAAGGCCT
AGGCCATTCC GTGAGAAGCT CCCGCCAGTG GAGCCGCTTA TCACAGGCGT GAGAGTTATT
GACACAATGT TCCCAATTGC CAAGGGAGGG ACGGCGGCGG TGCCGGGGCC ATTTGGCTCT
GGGAAGACTG TTATGATAAG GACTCTCTCC ATGTTTGCCC AGAGCAGGAT AATTATTCCA
GTCTTATGCG GCGAGAGAGG AAACGAGGCG GCTGATGCCC TCCAGGGTCT ATTGAAGCTG
AAGGACCCAT CAACTGGCAG GCCTCTGCTA GAGAGGACCA CCATAATTGT AAATACGTCA
AACATGCCAG TGGCCGCGAG AGAGGCGTCT GTGTACATGG GCACTACCTT GGGCGAGTAC
TTCAGAGACC AGGGATACGA CGTGTTGGTG TTGGCTGACT CAACTTCGCG CTGGGCTGAG
GCAATGCGTG AAGTGGCGTT GAGAATTGGC GAAATGCCAT CGGAGGAGGG GTACCCGGCG
TATCTGCCCA CCCGCCTTGC CGAATTTTAT GAGAGAGCTG GACGCGTGGT CCTAATTGGC
AGCGGGGAGA GAGTGGGCTC GTTGACCATA GCGGCCTCCG TCAGTCCCCC GGGCGGAGAC
TTCACAGAGC CCGTCACGTC TAACACACTG CGCTTCATAG GAGCCTTCTG GCCTCTGTCG
CCGAGGCTTG CATACTCCCG CCACTACCCC GCCATTGACT GGCTCATGGC TTTTTCGCGG
TATGTCGACA CGGTGGAGGT TTGGTGGAGT AAGAACGTTT CGCCCGAGTG GAGGCGTATA
AGAGACGTAT TGCAGTCGAT CTTAGTTAAG GAGGCTGAGC TACAGGAAAT TGTAAGAATT
CTGGGCACAG AGGCGCTCAG CGAGTACGAG AAGCACATTC TCAACGTGGC ATTTATGATA
AGAGAGGGCT TCTTGAAGCA GGATGCATAC AACCCGGTGG ACACGCCCAC CTCGCCCATT
AAGCAGTTCC TCTTGATGAA GGCGATATAC GTCTACTACG AGGAGGGGCT CAAGGCCATT
GAGGCAGGGG TGCCCGCGTC TATTTTAAGA GAGCTAGACA CTGTGAAGCG TCTGCCAAGG
CTTAGAATGG AGCTCACCAA CGATGTGGCA AAGGAGGAGC TTACCAAGTT TATAGAGGCG
TTAACAAGCG AAATTAGGTC TACAACGGCT GGCAGAAGGC CATAA
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| Protein sequence | MSGRIEYISG PVVKAELPGA RLYELVFVGE LKLFGEVVRI QGDKAFIQVY EDTTGLKPGE
PVERTGEPLS AWLGPTILGR IYDGVQRPLK DIESISKSPF IARGIGYDKA PPLDLNAVFD
FKPAVKPGDF VQPGDVLGSV KETELITHYI TYPPLPENAP GEVEWVADGK YKVDDVIARI
KTKRGVVEVK MWHKWPVRRP RPFREKLPPV EPLITGVRVI DTMFPIAKGG TAAVPGPFGS
GKTVMIRTLS MFAQSRIIIP VLCGERGNEA ADALQGLLKL KDPSTGRPLL ERTTIIVNTS
NMPVAAREAS VYMGTTLGEY FRDQGYDVLV LADSTSRWAE AMREVALRIG EMPSEEGYPA
YLPTRLAEFY ERAGRVVLIG SGERVGSLTI AASVSPPGGD FTEPVTSNTL RFIGAFWPLS
PRLAYSRHYP AIDWLMAFSR YVDTVEVWWS KNVSPEWRRI RDVLQSILVK EAELQEIVRI
LGTEALSEYE KHILNVAFMI REGFLKQDAY NPVDTPTSPI KQFLLMKAIY VYYEEGLKAI
EAGVPASILR ELDTVKRLPR LRMELTNDVA KEELTKFIEA LTSEIRSTTA GRRP
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