Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_2035 |
Symbol | |
ID | 4909014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 1888659 |
End bp | 1889573 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640125788 |
Product | glycosyl transferase family protein |
Protein accession | YP_001056916 |
Protein GI | 126460638 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00000868253 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGATTTTGT CTATGATTAC GAAGAACTCG GCGGAGAAGG TGGGAGCGGA TTTCGAGGCC GTCTGGGTCT CCTCGCTACA AGTGCCTTAC CGCGCCATAA TCCTCGTAGA CGACTCCGAT ACGCCTAAGA CGAGGGAATT TGTAAAACGC TTTGCCGATG CGCATGGGAA AGAGCTTGTT GTGGAGAGAA GCAGGCTGTA CGGGTGGCAC AAGCCCACCC GTGCCACTGC TAGGCAGACC GCCATTGACA TCTTCTTCGA GCGGTTCAGT GACGAGTGGC TCTTCTTCCT AGACGATGAC TTCATATTGA GAAGCGGCTG GTGGGAAGAG GCGCGGGGCT ATGTGGAAGA GCCCCGCGTT GGCCTTGTGT GGGGAATTGA CTATACGCCG AGATGGCAGG AGAGAGCGGC GTGGGTGAGA GTCAGGGGAT TTGACGAGGT GACTCATGCA ATTGAGAACT TCAAAGTGAG AGGTGGGCTC CATGACACGC TCCTGAGGAG ACGCGCGTTG GAGGGGGTTA AGATACCGCC CTGGCTTAAC GTGTTTGAAG ACGCATGGGT TAAGAAATAT GTGGAGTGCA AAGGGTGGGA GTGGCGGATA GTCAAGACGG GTGGAGACCA CTTACGTGAT GAGACGACTG GGGGTTATGA GAGGGCTGAC TTCTACATAA TGGCCTACGT CTCCTCTGCC CTTAAGCTAG AGCCCGTGTC GTGGCGTAGC TTCCTAAAGG CACTCCTCGG CTTACCCGGC TACGTCTATT ATTCTGCAAA GGCGTACGGA CTGCGGTTAG CGCTACAGCG AGGGATAGAC AAGTGGAGAC ATAGGGTGAT ATACCGTTGG CTGTTGCTAA GACATAAGCG CAATGAGGAT CCCTGTCACG TTGTGATAAC AAGCTCACTA TCACCGCCGA GATAA
|
Protein sequence | MILSMITKNS AEKVGADFEA VWVSSLQVPY RAIILVDDSD TPKTREFVKR FADAHGKELV VERSRLYGWH KPTRATARQT AIDIFFERFS DEWLFFLDDD FILRSGWWEE ARGYVEEPRV GLVWGIDYTP RWQERAAWVR VRGFDEVTHA IENFKVRGGL HDTLLRRRAL EGVKIPPWLN VFEDAWVKKY VECKGWEWRI VKTGGDHLRD ETTGGYERAD FYIMAYVSSA LKLEPVSWRS FLKALLGLPG YVYYSAKAYG LRLALQRGID KWRHRVIYRW LLLRHKRNED PCHVVITSSL SPPR
|
| |