Gene Pcal_2035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_2035 
Symbol 
ID4909014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1888659 
End bp1889573 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content54% 
IMG OID640125788 
Productglycosyl transferase family protein 
Protein accessionYP_001056916 
Protein GI126460638 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000868253 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTTTGT CTATGATTAC GAAGAACTCG GCGGAGAAGG TGGGAGCGGA TTTCGAGGCC 
GTCTGGGTCT CCTCGCTACA AGTGCCTTAC CGCGCCATAA TCCTCGTAGA CGACTCCGAT
ACGCCTAAGA CGAGGGAATT TGTAAAACGC TTTGCCGATG CGCATGGGAA AGAGCTTGTT
GTGGAGAGAA GCAGGCTGTA CGGGTGGCAC AAGCCCACCC GTGCCACTGC TAGGCAGACC
GCCATTGACA TCTTCTTCGA GCGGTTCAGT GACGAGTGGC TCTTCTTCCT AGACGATGAC
TTCATATTGA GAAGCGGCTG GTGGGAAGAG GCGCGGGGCT ATGTGGAAGA GCCCCGCGTT
GGCCTTGTGT GGGGAATTGA CTATACGCCG AGATGGCAGG AGAGAGCGGC GTGGGTGAGA
GTCAGGGGAT TTGACGAGGT GACTCATGCA ATTGAGAACT TCAAAGTGAG AGGTGGGCTC
CATGACACGC TCCTGAGGAG ACGCGCGTTG GAGGGGGTTA AGATACCGCC CTGGCTTAAC
GTGTTTGAAG ACGCATGGGT TAAGAAATAT GTGGAGTGCA AAGGGTGGGA GTGGCGGATA
GTCAAGACGG GTGGAGACCA CTTACGTGAT GAGACGACTG GGGGTTATGA GAGGGCTGAC
TTCTACATAA TGGCCTACGT CTCCTCTGCC CTTAAGCTAG AGCCCGTGTC GTGGCGTAGC
TTCCTAAAGG CACTCCTCGG CTTACCCGGC TACGTCTATT ATTCTGCAAA GGCGTACGGA
CTGCGGTTAG CGCTACAGCG AGGGATAGAC AAGTGGAGAC ATAGGGTGAT ATACCGTTGG
CTGTTGCTAA GACATAAGCG CAATGAGGAT CCCTGTCACG TTGTGATAAC AAGCTCACTA
TCACCGCCGA GATAA
 
Protein sequence
MILSMITKNS AEKVGADFEA VWVSSLQVPY RAIILVDDSD TPKTREFVKR FADAHGKELV 
VERSRLYGWH KPTRATARQT AIDIFFERFS DEWLFFLDDD FILRSGWWEE ARGYVEEPRV
GLVWGIDYTP RWQERAAWVR VRGFDEVTHA IENFKVRGGL HDTLLRRRAL EGVKIPPWLN
VFEDAWVKKY VECKGWEWRI VKTGGDHLRD ETTGGYERAD FYIMAYVSSA LKLEPVSWRS
FLKALLGLPG YVYYSAKAYG LRLALQRGID KWRHRVIYRW LLLRHKRNED PCHVVITSSL
SPPR