Gene Pcal_2015 details

Gene Information

• Locus tag: Pcal_2015
• ID: 4908977
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: -
• Start bp: 1870298
• End bp: 1870945
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 640125768
• Product: hypothetical protein
• Protein accession: YP_001056896
• Protein GI: 126460618

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 10
• Fosmid unclonability p-value: 0.000606511
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGAATTTAA ATACACGCGC AAAGAAAGGC GTGAGGCTCC TCGCCGCCGT CCTCCTCCTC 
GCATCGGCGA CTTGGGCCAT GGTGCTCGAC TGGAACGGCA GGCCCCTCTC CGAAGGCACC 
GCAGTCGTGT ACGATGGAAG AGGCGCGGTG GTGGGCCTCT CCTACATAAC CTCGGGGCGC 
CTGCTCTACC CACTGCCCTG GGGCCCCGGC TACACGCTCC GCGTGGCCTG GGGATTCGCC 
TCGCTGTACG AAGTCCTCGG GGGCAACGTC GTGTGGATCT ACGACAGCGC GGTAACCCGC 
GACACGATCG AGCTGGGGTC ACCCCAGTGG GGAATCCGGA CGTGGGTATA CCCAGTGACA 
GTAGCCATCA GAGACGGCGC GGGGAAGCCC GTGGCCGGCT GTGTGGCCAA GGTGGTAGAC 
GCCGCGACGA GGGGCAGGTG GCTGTACATC TTCTCCCCAA CAGACTCCGA CGGCTCCGTC 
TCAATCAGCC AAGCCCCCGC CACAGACTAC TACGTCTATG TGTACTGCGA CGGCGTATTG 
GCGGCCGAAG GAAAGTTCTC CATACAAAGG GGAGCCCCCT CCACGGCGTG GAACGTAGAA 
ATGAAAGTCC AGTTCATAGA CACGGTAAAA GTAGCCAACG CGCCATAG 

 

Protein sequence

MNLNTRAKKG VRLLAAVLLL ASATWAMVLD WNGRPLSEGT AVVYDGRGAV VGLSYITSGR 
LLYPLPWGPG YTLRVAWGFA SLYEVLGGNV VWIYDSAVTR DTIELGSPQW GIRTWVYPVT 
VAIRDGAGKP VAGCVAKVVD AATRGRWLYI FSPTDSDGSV SISQAPATDY YVYVYCDGVL 
AAEGKFSIQR GAPSTAWNVE MKVQFIDTVK VANAP