Gene Pcal_1967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1967 
Symbol 
ID4910201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1831286 
End bp1832044 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content65% 
IMG OID640125719 
Productresolvase domain-containing protein 
Protein accessionYP_001056848 
Protein GI126460570 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATACCAG CGGTCACGTA CATACGCGTC TCCACTGAGG AGCAGGACCC GGAGAATCAG 
CGCCTTTACC TGGAGAAGTG GGCCTCTGAG CACGGCTTGG CCATTGTGAA GCACTACGTG
GACGTGGGAG TGTCGGGGGC CTCTGCGCCG TGGGAGAGGC CGGCTTTTCA GCGGCTGATG
AGCGAGGTGG AGGCCCTGGA GCCCAAGCCG AGGGTCCTCC TCGTGTACGA GACCTCTAGG
CTTGTGAGAT CTTTCCAAGA GCTCTTCCAC CTCCTCGACC TCGTGGAGAA CAAGCTGGGG
CTCGTGGTAG TGTCGGCGTC TGAGAGGGAG CAGGCGCTAC AGTCCCTGGA CGGGGTCTAC
CGCCAGTTCC TCCGGGCCGT CTTGGCATTC GTGGCCCACA TGGAGCGGGA GTTCATCCGC
CAGAGGACGA AGGCGGCGCT CGAGAGGGCG AGGGCTGCGG GCAAGGTGAA CAACGTGGCT
GAGCGACACC CCGAGCTTGT GGAAGCGGTG GCCGAGTACT ACAGGCAGAG CGGCTCTCTG
AGAGAGACGG CCAGGGCCTT CGGCCTGTCG CTCTACGAGG TGAGGAGGCT CCTCGCCGTA
GCGGGCCTCT ACCGCCCCAC CCCCTACACC TGCCCCAGGT GCTTCTCCCG CCTCAAGGTG
GCCGAGCGAG ACGTCAGAGT GGCCGGGGGG AGATACGCAG TGGTAGAACG CCTCTACTGC
CCCAACTGCG GCTACGAGGA GGTGAGAAAG GCGGACTGA
 
Protein sequence
MIPAVTYIRV STEEQDPENQ RLYLEKWASE HGLAIVKHYV DVGVSGASAP WERPAFQRLM 
SEVEALEPKP RVLLVYETSR LVRSFQELFH LLDLVENKLG LVVVSASERE QALQSLDGVY
RQFLRAVLAF VAHMEREFIR QRTKAALERA RAAGKVNNVA ERHPELVEAV AEYYRQSGSL
RETARAFGLS LYEVRRLLAV AGLYRPTPYT CPRCFSRLKV AERDVRVAGG RYAVVERLYC
PNCGYEEVRK AD