Gene Pcal_1940 details

Gene Information

• Locus tag: Pcal_1940
• ID: 4908344
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: -
• Start bp: 1805546
• End bp: 1806238
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 640125691
• Product: hypothetical protein
• Protein accession: YP_001056822
• Protein GI: 126460544

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 33
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCTAAGG CGAACTACCT TGTCCCACTG GTGGTCGCAG TGGTGGTGGG CCTTGCGGCG 
TATTTCGCAG GCGTGTCCAC TGCCCCAACG GCTACAGTGA CTCAGACCGT CGAGCGGACT 
GTTACTCAGA CCGTCACCCA GGCAGTTGTT AAGCGGAATG CGCTAGAGGA GATGTTTACT 
AACGGCACCT TTGCGCATCG GTGTATTCTC TGCGGGATGG ACGTCTCCGA GGCTGAGAAG 
ATGGGCGTCT CAGCCATAGT AACCTTCTCC ACGGGGAAGA CGGCTAAGAC CGACGACATA 
GGTTGCATAT TTAGAATGGC GTTGATGCCT GTGGAGAAGT GGCCCTTCAT TAGGCGTATC 
ACGAACGTCA CAGGGCTGTC TACAGCGGAG GTGAGACAGG CGCTGGGCGA CGTGGTGTCC 
GTCATGGTTC CCGACTACGA GAGCGCTAAG GCCGGCGTGC CGCTTTATAT TGACGCCAAG 
AGGGCCTACT ACGTCATTAT GCAGAACCTG AAGACCCCCA TGGGCGACTG CGTGTTCGCC 
TTCGCCGATA AAGACACCGC GGCTAAGTAC AACACCACGG TGTACGCCTA CGACCAGATG 
TTACAATTAT ACAAAGAGGT GATGCAGAAG ACCGGCATGC CGCGGCCCAA TTGGTGCAGA 
AGCGGCGGAA TGATGCCCAG CCACGGCGGC TAG 

 

Protein sequence

MAKANYLVPL VVAVVVGLAA YFAGVSTAPT ATVTQTVERT VTQTVTQAVV KRNALEEMFT 
NGTFAHRCIL CGMDVSEAEK MGVSAIVTFS TGKTAKTDDI GCIFRMALMP VEKWPFIRRI 
TNVTGLSTAE VRQALGDVVS VMVPDYESAK AGVPLYIDAK RAYYVIMQNL KTPMGDCVFA 
FADKDTAAKY NTTVYAYDQM LQLYKEVMQK TGMPRPNWCR SGGMMPSHGG