| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1837 |
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| Symbol | |
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| ID | 4908356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1698771 |
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| End bp | 1699556 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640125587 |
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| Product | uridine phosphorylase |
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| Protein accession | YP_001056720 |
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| Protein GI | 126460442 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG2820] Uridine phosphorylase |
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| TIGRFAM ID | [TIGR00107] purine-nucleoside phosphorylase, family 1 (deoD)
[TIGR01718] uridine phosphorylase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.748158 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACAAA GGCCGCAGAT AGGGCACAAG GCGTACCACT TGTTGATAGG CCCCGGCGAC
GTCCCGCGCT ACGTCCTCCT GCCAGGGGAC CCCGGCCGCG TCCCACTTAT TGCAAAACAC
TGGCAGGAGG CTAGAGAAGT GGCGCGCAAC AGAGAGTTTA CGACGTGGGT GGGCATATAC
AAGGGGGTTA GGATAGCGGC CACCTCCACG GGCATAGGGT CTGGCTCCAC CGCCATTGCG
GTAGAGGAGC TCCTTTACGC AGGCGCTGAT ACGCTCATAA GAGTGGGGAC CACCGGCGCG
CTTAAGAGGG AGATAAAGCT GGGCGACTTG ATAATCGGCA CCGCCGCCGT CAGGTGGGAG
GGGGCAAGCC GCTGGTATGC GCCTCCTGAG TACCCCGCAG TTGCCCACTG GCAAGTGGTA
AAGGCCCTCG TCGACGCGGC GGAGGGACTC GGCGTGAGAC ACCACGTGGG CATTGTGGCC
TCCACCGACT CCTTCTACGT TGGACAAGAG AGGCCAGGGT TCCGGGGCTT CATGCCGCCT
TGGGCGAGGG GGCTTATAGA GACTTTGAGA AGCCTCAGGG TGCTGTCCTT TGAAATGGAG
TCTGCCACAA TTTTTACCCT TGCCTCTATC TATGGGGCGC GGGCCGGCGG AGTCTACGCG
GCCATAGCCA ACAGAGAGAC CGACGAATTT CAGCCAGAGG TGGGGGTTGA GGACGCAATA
AAGGTGGCCA ACGAGGCGGT TAAGATATTG GCGGAGCATG ATAATAAAAG TGGTGCAGGT
ACGTGA
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| Protein sequence | MAQRPQIGHK AYHLLIGPGD VPRYVLLPGD PGRVPLIAKH WQEAREVARN REFTTWVGIY
KGVRIAATST GIGSGSTAIA VEELLYAGAD TLIRVGTTGA LKREIKLGDL IIGTAAVRWE
GASRWYAPPE YPAVAHWQVV KALVDAAEGL GVRHHVGIVA STDSFYVGQE RPGFRGFMPP
WARGLIETLR SLRVLSFEME SATIFTLASI YGARAGGVYA AIANRETDEF QPEVGVEDAI
KVANEAVKIL AEHDNKSGAG T
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