| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1732 |
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| Symbol | |
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| ID | 4909783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1613818 |
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| End bp | 1614213 |
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| Gene Length | 396 bp |
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| Protein Length | 131 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640125479 |
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| Product | 30S ribosomal protein S8e |
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| Protein accession | YP_001056615 |
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| Protein GI | 126460337 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2007] Ribosomal protein S8E |
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| TIGRFAM ID | [TIGR00307] ribosomal protein S8.e |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.597289 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAGCTGG GGGCGTTTTA CAAAGGTGGA GACTTAGTAA AGCCAAGCGG AGGCAAGAAG
GGAAGGGTAA GAAAGACGAA AAAGAAGGCG CTCGGCGGAG GTCCCCCACA GATTCCAAAG
CTAGGGGAAG AGGATATCAG ATACGTGGAG AGGGTAAGAG GAGGCAACCA CAAGGTGAGG
CTGAGGCAGG CCAGATATGC AAATGTCTAC ATACCTAAGG AGAGGCGCCA TGTAAAAGCG
AAAATTCTCT CAATAGTTTC CTCCCCATCA AACCCCGACT ACGCGAGGCG GAACTACATA
GTTAAGGGGG CCATTATCCA GACGGAGGTG GGGAAGGCCG TGGTCACCTC GCGCCCCGGC
CAAGACGGCG TGATAAACGC CGTCCTCATA GAATGA
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| Protein sequence | MKLGAFYKGG DLVKPSGGKK GRVRKTKKKA LGGGPPQIPK LGEEDIRYVE RVRGGNHKVR
LRQARYANVY IPKERRHVKA KILSIVSSPS NPDYARRNYI VKGAIIQTEV GKAVVTSRPG
QDGVINAVLI E
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