| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1729 |
|---|
| Symbol | |
|---|
| ID | 4909716 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | + |
|---|
| Start bp | 1612462 |
|---|
| End bp | 1612761 |
|---|
| Gene Length | 300 bp |
|---|
| Protein Length | 99 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640125476 |
|---|
| Product | 50S ribosomal protein L21e |
|---|
| Protein accession | YP_001056612 |
|---|
| Protein GI | 126460334 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2139] Ribosomal protein L21E |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.74633 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAAGC GGACTCACGG CTACCGTTAC AAGAGCCGGA AGTTGCTCTC TAAGGCACCA
CGGGAGCGCG GAATGTCGGG ACTCTCTAGG CTTCTCTATG AGTATAAGCC GGGCGACAAG
GTGGTGATAG ACATAGATCC GACGTTTATC TCAACGGCGC CCCACCGGCG GTACCAAGGC
AAAGTTGGCG TCGTAATAGG CACACGGGGG AGGGCATATG TAATAGAGAC GTACATTGGG
GACAAGAAGA AGATCATAAT AACGACGCCG GAGCATTTGA GGCCACACTT GGGAGGCTGA
|
|---|
| Protein sequence | MVKRTHGYRY KSRKLLSKAP RERGMSGLSR LLYEYKPGDK VVIDIDPTFI STAPHRRYQG
KVGVVIGTRG RAYVIETYIG DKKKIIITTP EHLRPHLGG
|
|---|
| |