Gene Pcal_1722 details

Gene Information

• Locus tag: Pcal_1722
• ID: 4908657
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 1605994
• End bp: 1606476
• Gene Length: 483 bp
• Protein Length: 160 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 640125469
• Product: hypothetical protein
• Protein accession: YP_001056605
• Protein GI: 126460327
• COG category: [S] Function unknown
• COG ID: [COG1720] Uncharacterized conserved protein
• TIGRFAM ID: [TIGR00104] probable methyltransferase, YaeB/AF_0241 family

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 23
• Fosmid unclonability p-value: 0.579056
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGGCGGAGA TTTGTCTAAG GCCTATAGGC GTAGTGGAAG TCGGCTTGCC CCGCAGCGGC 
GGGGTAGACA GATTTAGTTA TGTATCTACC GTAAGGATAT TCGACGAGTT TGCAGAGGGG 
CTGGCGGGTC TCGAGGAATA TAGCCATGCC ATAATCGTAT GGCATCTCCA TGAGGCGCCC 
CCCTACAGGC TGAAGGTTAG GCCGTGGGGC AGGGAGGACA TGCCGGAGGT GGGGATCTTC 
GCCACTAGGT TTACGCCGAG GCCGAACCGC ATTGCAACAA CCATCGTAAA ACTCGTGGAC 
GTGGACCCCC CGCGTATACG TGTCATGGGG CTAGACGCTT GGACAGGTAG CCCCGTGCTC 
GACATAAAGC CGTACGACCA CCTCGACGTG GTAAACGAAT TTCGCACGCC GGATTGGGTA 
GAGCGATTTT TCGAAGAGCA GGGCGGCGCC TTGCCCAAGT GGCTAGGGCC TAGGAGGGCT 
TAG 

 

Protein sequence

MAEICLRPIG VVEVGLPRSG GVDRFSYVST VRIFDEFAEG LAGLEEYSHA IIVWHLHEAP 
PYRLKVRPWG REDMPEVGIF ATRFTPRPNR IATTIVKLVD VDPPRIRVMG LDAWTGSPVL 
DIKPYDHLDV VNEFRTPDWV ERFFEEQGGA LPKWLGPRRA