| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1650 |
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| Symbol | |
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| ID | 4908651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1539612 |
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| End bp | 1541867 |
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| Gene Length | 2256 bp |
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| Protein Length | 751 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640125397 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001056533 |
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| Protein GI | 126460255 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTACG GAGCCGGTGA CGTGTCATTT TTGAGAAAGG TATTAGAGGA CCCAGGGAGG
GAGGTGGTGT ATGTGAAGAC TGACGAGGCT GAGAGAGTGG AGCCCTGTTG TGACGTGGGG
GAGGTGCTTA GGGCTGAGGT GGCGCAGGCG TTTAAGTCGC TGGGGATTTC CTCTCTCTAC
CGTCATCAGT ATGACGCAGT TGTGAGCATA AGGGCGGGGA GAGACACGGT AATTGTCGCG
GGCACCGGCA TGGGGAAGAC CGAGGCCTTC CTGGCCCCCA TACTAGAGGC CTCTCTTGAA
TCTCTCGGGG GGCCCGTCGC GCTTGTCCTC TACCCCACCA AGGCCCTTGC TCGAGATCAG
TTGTCTAGGC TTAGGAGATT CGCCGACCGG CTGGGGGTGA GAGTCATGGT TTACGACGGG
GACACCCCCC AGAGGGAGAG GAGGATATTG TACGACTCAC CTCCCCACAT CATTGTGTCA
AACCCAGACA TGGTTAGCCA AGCCCTCATG CATGTGGCTA AGTTCAGAGA GCTTGTGAAA
AGGGTTAGAT ACCTAGTCCT CGACGACTTC CACGTGTACG GGGGAGTCTT TGGCTCACAT
ATGTACTACC TACTTCGGCG CCTGCGGCGG TTTTCCAGGC CTGTGTATAT CGCCACCTCT
GCCACCGTGG GCAACCCAGC CGAGTTTACA CAAGCACTGT TTGAGAGCGA TAGAGTGAAC
GTAGTCGTCG GCCCCCTGGG GCGGCGGGGG AGGCTGGTGC AGGTCTTGGC TAGGCCTAGG
TTTAGGTCTA AGTGGGCTGA GGCTGCTAGG CTGGCCGCGA TATGTGTGGA GGAGGGGGTG
AAGTGTCTCG TGTTTACGGA CAGCCACAGA TACAGCGAGG TTATCTACAG GGCGTTGAAG
ATGGGGGGCT ACGGCGAAAG AGTGGCGGTG CACAGGGCTG GGCTAGACGC AGAGGAGAGG
AGGCGTGTGG AAGACGCCTT TAAGAGGGGG GAAATCGACG TGGTGATATC TACGCCCACC
TTAGAGCTGG GCGTAGACAT AGGCGACGTG GATGTGGCAG TTCTAGCCTC CATACCGCCT
TCCTACAACC GCTACCTACA GCGCGTCGGG CGAGTGGGGC GGCGCGGGCA GACGGGCTAC
GTTGTACAGA TACTTGGCAA CGACCCCATC TCCCAGTACT ACCGCAACTA CCCCCACGAG
TTTTTTGCAA GAGCGCCGGA GCCGCTTGGC TTTGAGAAAG AGAACGAGGA CGTCGCAGCC
CTCCACCTCT TGGCGGCGGC CTCCGACATG CCCCTACGGC TCAGCGAGTT GAGCAATTTT
GAGAAAGAGC TGGCGGAGTC CCTCCTGGCG AAGGGCTACT TGGCCAAGGT GGGCAACTAC
TTGCGCATAA CCCCAGCGGG GAGGGAGGCG TTGAGCTCCC TCAGCCTGAG GGGGTCGCCC
CACGTCGTAA AGATAAAGAC TGTGGATGGA AGGACGCTGG GGGAGAGGGA GTTGCCCCTC
GCCCTCTACG AGCTTCACCC AGAGGCCATA TACATGCACG GCGGGAGGAC CTACGTGTCC
AAGTCCCTCG ACTTGACGAA GAGAGTCGCA ATCGTGGAGC CTGTGGACGC CGAGGACTTG
GTCACTCAAG CCCTCGAGGA CATGGATCCC GAGCTCGTGG AGGTTGTAGA GGAGGGCTCT
GTGGAGGGCG TCCGCTATCA GTACGGGCGT CTTAAAATTA GGATCACGGT GCACGGCTAC
GCCTTAAAGC GGTTTACAAC TGAGGAGACG CTGGGCGAGT ACCCCATAGA GCCTCTCTCC
TACGAGTTTG AGACCAAGGG CGTCGTGTTG TACATGCCCC TGGTGCGCTT CACGTCTGAG
GAGGCCTTGG ACTGGGAGGC GCGGGCCAAG GGGTACCACG CCACTGAGCA CGTCCTAATA
TCTGCGGCCG AGATCGCAAT AGGCTCGGCG AAGACCGATC TAGGCGGCAT AAGCTACCCG
GACGGCGTCA TAGTCATATA CGACTCCCAC GTGGGAGGCA ACGGCACCTC TAGACTCCTC
TTAAAGAACT TTAGGCGCGT CGCCGAGGTG GCGTACAAGA TAGTGAAGGG CTGCGACTGC
GTCGACGGAT GCCCAAAGTG CGTCTTCTCC CCCTACTGCG GCAACAACAA CAAGATGCTG
TCGAGGCGGA ACGCCGCGAG GATTTTAGAG CATGTGCTCA AAGGCGGCGG CGCTTCGCCC
GTTCTTGAAA TACCGAAGGT CCGCGGCATA GTGTAA
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| Protein sequence | MHYGAGDVSF LRKVLEDPGR EVVYVKTDEA ERVEPCCDVG EVLRAEVAQA FKSLGISSLY
RHQYDAVVSI RAGRDTVIVA GTGMGKTEAF LAPILEASLE SLGGPVALVL YPTKALARDQ
LSRLRRFADR LGVRVMVYDG DTPQRERRIL YDSPPHIIVS NPDMVSQALM HVAKFRELVK
RVRYLVLDDF HVYGGVFGSH MYYLLRRLRR FSRPVYIATS ATVGNPAEFT QALFESDRVN
VVVGPLGRRG RLVQVLARPR FRSKWAEAAR LAAICVEEGV KCLVFTDSHR YSEVIYRALK
MGGYGERVAV HRAGLDAEER RRVEDAFKRG EIDVVISTPT LELGVDIGDV DVAVLASIPP
SYNRYLQRVG RVGRRGQTGY VVQILGNDPI SQYYRNYPHE FFARAPEPLG FEKENEDVAA
LHLLAAASDM PLRLSELSNF EKELAESLLA KGYLAKVGNY LRITPAGREA LSSLSLRGSP
HVVKIKTVDG RTLGERELPL ALYELHPEAI YMHGGRTYVS KSLDLTKRVA IVEPVDAEDL
VTQALEDMDP ELVEVVEEGS VEGVRYQYGR LKIRITVHGY ALKRFTTEET LGEYPIEPLS
YEFETKGVVL YMPLVRFTSE EALDWEARAK GYHATEHVLI SAAEIAIGSA KTDLGGISYP
DGVIVIYDSH VGGNGTSRLL LKNFRRVAEV AYKIVKGCDC VDGCPKCVFS PYCGNNNKML
SRRNAARILE HVLKGGGASP VLEIPKVRGI V
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