| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1520 |
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| Symbol | |
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| ID | 4908620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1420284 |
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| End bp | 1421789 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640125269 |
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| Product | carbohydrate kinase, YjeF related protein |
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| Protein accession | YP_001056405 |
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| Protein GI | 126460127 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
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| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000211008 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCATCT CTTCTCTGGA GATGTATGTG GCGGATCGTA ATGCCGAGTG GCTTGGGGTG
CCGCGGCTTG TGCTTATGGA GAACGCCGGG GCGGCTGTGG CTAGGAACCT TCTGCGGAAG
TTTCCCAACG CGTCAAACGT CCTGGTGGTG TGTGGCACTG GTGACAACGG CGGTGATGGC
TACGTCGCGG CGCGGCACCT CCACGCGGCT GGGAAGAGGG TGAGGGTGGT GGGGCTGGGC
GAGCCAAGGG AGGAGCTGGC GAGGGTCAAC TTCGAGGCTG TGAGGAGGCT GTGGGGGGTG
GAGCTGGCGG TGGTCCGCGA CGTGTTGGAG CTGTTGGCTT TGCAGGACTG GTTCCTCTGG
GCTGACGTCA TTGTAGACGC CGTGTTGGGG ACGGGGATTA GGGGTGTGTT GAGGGAGCCG
CAGGCCACCG CCATTGACCT CATGAACGCC GCGGCGGCGC CTAAGGTGGC TGTGGATGTG
CCAAGCGGCC TTGACCCAGA CACGGGGGAG GTGAGAGACA AGGCCGTCAA GGCCGCGCTG
ACGGTCACTT TCCACAAGGC TAAGAGGGGC CTCTTGGCGC CTGGCGCCGA GAGGTACGTG
GGGGAGCTTG TGGTGGAGCC CATCGGCATC CCGCCTGAGG CTGAGCTGGT GGTGGGGCCG
GGGGACTTCG CCTACCTCAA CTTCTCTAGG CGGGCTGACT CTAAGAAGGG GGACCACGGG
AGGGTGCTGG TGGTTGGGGG CTCGTTGGAG TACTCGGGGG CCCCCGTCTA CGTGGCTAAG
GCCGCTCTGA GAGGCGGCGT GGACTTGGCA GTGGTGGCGG CGCCCGAGCC GGCGGCCTAC
GCGGCCAAGG CGCAGGGCCC TGAGGTCATC GCCATACCCC TCGAGGGGGC CCGCCTCTCC
CTCAAACACG TGGACAAGCT GGCGTCTCTT GCGGAGCGGT TCGACGTAGT GGCCATGGGG
CCCGGCCTTG GGACTGAGGG AGAGACGCCA GACGCCGTGC GCGAGCTGTT CAACAAGCTG
GCCGGGAGGA AGCCGCTGGT GGTAGACGCA GACGCGATAA AGGCGCTTAG GGGAGTGGAG
GCGAGGGGTG TCGTGGTCTT TACTCCGCAC GCGGGGGAGT TCAAGGCGCT CACCGGCGTG
GAGCCCCCCG CAGATCTGAG GGCTAGGGCC GAGGTGGTGA AGGAGTGGGC GGCGCGGCTC
GGAGGCGCGG TCATCCTCCT CAAGGGCAGG TTCGACGTGG CCTCAGACGG GCAGAGGGTT
AAGATAAACG CCACGGGGAC ACCTGCAATG ACCGTGGGGG GCACTGGCGA CGTGCTCACG
GGCCTTGTGG CGGCCTTCCT CACCAAGTCC AAGGACCCCC TAGAGGCGGC GGCGGTTGCC
GCCTTCGTCA ACGGCCTCGC TGGCGAAGAG GCGGCGGCTC AGCTGGGCTT CCACATAACA
GCCACAGACC TCCTAGACCG CATCCCCGGC GTAGTCAAGA GGTTTGCGAG AGAGCAGGTG
GTTTAA
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| Protein sequence | MAISSLEMYV ADRNAEWLGV PRLVLMENAG AAVARNLLRK FPNASNVLVV CGTGDNGGDG
YVAARHLHAA GKRVRVVGLG EPREELARVN FEAVRRLWGV ELAVVRDVLE LLALQDWFLW
ADVIVDAVLG TGIRGVLREP QATAIDLMNA AAAPKVAVDV PSGLDPDTGE VRDKAVKAAL
TVTFHKAKRG LLAPGAERYV GELVVEPIGI PPEAELVVGP GDFAYLNFSR RADSKKGDHG
RVLVVGGSLE YSGAPVYVAK AALRGGVDLA VVAAPEPAAY AAKAQGPEVI AIPLEGARLS
LKHVDKLASL AERFDVVAMG PGLGTEGETP DAVRELFNKL AGRKPLVVDA DAIKALRGVE
ARGVVVFTPH AGEFKALTGV EPPADLRARA EVVKEWAARL GGAVILLKGR FDVASDGQRV
KINATGTPAM TVGGTGDVLT GLVAAFLTKS KDPLEAAAVA AFVNGLAGEE AAAQLGFHIT
ATDLLDRIPG VVKRFAREQV V
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