Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1519 |
Symbol | |
ID | 4909351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 1418696 |
End bp | 1420003 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640125268 |
Product | periplasmic binding protein |
Protein accession | YP_001056404 |
Protein GI | 126460126 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000588293 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAGTCAAA AAATTACGCT GGGACTAGCC GCGGCTGCGT TGTTAATCTC CATACTGGCA GTGGCGCTGG CCTGGTCCAC CTCGGCTAAG GTCGAGGAGG CGCTCCACGC GACGGGGCAG GAGCTGGGGG CTCTCACATC TGCCGTAAAG TCGCTGAACT CCACCCTCGC CTCTCTGGCG TCTGGGGTTG AGCAGAGGCT GGCCAACGTG GAGAGGGAGG CCGCCGCGGC GAAAAACGCC ACGGCCATTC TGCTAAAGGC CGCCCAGGCC CCCGCCGGCG AGGTGCCGGT CAAGTACGCC AAGCTGTTCT CCATAAGGTA CGAGGGGGGC TACTACGTGC TGAGGGACGC CCTCGGCAGG ACGATACTCC TCGCCCCCAG GGGCGCGGGC CCGGCCCTCA CAAAGTTCTA CGTGGATAAG TACAAGCCAG CCGCCGTGGT CTACTACCCC GTGCAACGCG CCGTGTACAT GTCCTCTACG CATGTGGCCA TGGCGTACCG CCTGTACAAG GAGGGCGGCG ATGCCCACGT GCTTAAGTCG GTGGTGGGCA TAATGTGGGG GAAGGAGTAC GCGTGGCACC TCCCCGAGGT GGCGAAGGCC CTTGAGAACG GCACAATCAG GGACGTGGGG CCCGCCAGCT CGCCCAACTA TGAGCAAATA GCCGCGCTGA AGCCAGACGT GGTCTTTGTC TACTTCTACC CCGGCCCCTA CGGCACAGAG GCGGTGATAC AGCGGCTTGA CCAGTTGAAA ATCCCCTACG CCGTGGTCAA CGAGTTCCAG GAGGGGTCCC CCCTGGGCAG GGCCGAGTGG ATAAAGTTCA TAGCCGCCTT CTACAACCTC ACCGACGCGG CCGTCAAAAT CTTCGACGGG GCGGAGGCCA AGTGGAACAG CCTAGCCGCG TTGGCGAGGG AGGCCGAGCA TAGGCCAAGG GTGGCCTGGT TCATAATATT CGGCGGCGTC CTGTACCCAG CGGGGCCGCA GGTGAGAGAG CTCATATCCC TCGCCGGGGG CCGCTACGCC TATTCAAACT ACAGCCGCGT AGACCTGGAG GTGGTGCTGA AGGAGAAGGA CGTGGACGTC CTCGTGTGGT CGGGCTATGG CGTGCAGTCC GTCTCCGACA TTTTGAAAAT CGAGCCGAGG CTCTCCGAGC TAAAGGCCGT CGCAGTGGGC AGATTATACG CCTACAGCGA CGCCTTCTAC CAACTCGCCA ACGCATACCC CGACCAAGTG CTCGAAGAGC TACTCTGGAT AATACACCCC GAGCTGGCCC CGCCGGGCAA CTTCACCCTC TTTGTGCCAC TGAGGTGA
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Protein sequence | MSQKITLGLA AAALLISILA VALAWSTSAK VEEALHATGQ ELGALTSAVK SLNSTLASLA SGVEQRLANV EREAAAAKNA TAILLKAAQA PAGEVPVKYA KLFSIRYEGG YYVLRDALGR TILLAPRGAG PALTKFYVDK YKPAAVVYYP VQRAVYMSST HVAMAYRLYK EGGDAHVLKS VVGIMWGKEY AWHLPEVAKA LENGTIRDVG PASSPNYEQI AALKPDVVFV YFYPGPYGTE AVIQRLDQLK IPYAVVNEFQ EGSPLGRAEW IKFIAAFYNL TDAAVKIFDG AEAKWNSLAA LAREAEHRPR VAWFIIFGGV LYPAGPQVRE LISLAGGRYA YSNYSRVDLE VVLKEKDVDV LVWSGYGVQS VSDILKIEPR LSELKAVAVG RLYAYSDAFY QLANAYPDQV LEELLWIIHP ELAPPGNFTL FVPLR
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