Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1440 |
Symbol | |
ID | 4908340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 1347673 |
End bp | 1348320 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640125190 |
Product | uroporphyrin-III C/tetrapyrrole methyltransferase |
Protein accession | YP_001056326 |
Protein GI | 126460048 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0007] Uroporphyrinogen-III methylase |
TIGRFAM ID | [TIGR01467] precorrin-2 C20-methyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.294168 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCTCTACA TAGTGGGCGT CGGGCCGGGG GACAAGGAGC TCTTGACGCT TAAGGCGGTC AAAATTCTGC AGAGGGCAGA CGTGGTGGCC TACGGCGACT TGGTGCCAGA GGAGGTGGTG GAGGAGTTCG CCCCCCAGGC CGAGAGGGTG AAGATTGGGC ATAGGCATAA GGACCACGAC GAGGTCGTGG CTAGGTTGCT TGAGGTGGCC AGGGAGAAGA ACGTGGTGTT GTTGAAGAAC GGCGACCCCA CGGTGTTTGG GAGGGCGCAT CAGATCTGCC GCATGGCCCG CGCCGCGGGC GTGCCGTGCG AGATTGTCCC AGGCGTGTCC AGCTTCACCG CCGCCTCAGC CCTAGGCGGA GTGGAGCTAA CCGACGGCGT CGCCCTCCGC CACGTGGCCC TCCTCTCCTA CCCCCACGTC GACGAGGAGG TTCTCAAGAG CGTGAGAGCC GACGTGTACG TCATATTTAT GATGGGCGAC AGACTCTCCC AAGTGGCCGA GCTTGTGAAA AAGGTGTGCG GCAAAGCCGT GGAGGTCTAC GTGTGTAGCA GAATCTCCCT GGGAGGGACC TGCCTCCCAC TGGAGAAGGT GGAGAAGGTT GAGAAGCCCC TCCTAGTTAT TGTGAGAAAG TGCTGGTCCC CGCCCTAG
|
Protein sequence | MLYIVGVGPG DKELLTLKAV KILQRADVVA YGDLVPEEVV EEFAPQAERV KIGHRHKDHD EVVARLLEVA REKNVVLLKN GDPTVFGRAH QICRMARAAG VPCEIVPGVS SFTAASALGG VELTDGVALR HVALLSYPHV DEEVLKSVRA DVYVIFMMGD RLSQVAELVK KVCGKAVEVY VCSRISLGGT CLPLEKVEKV EKPLLVIVRK CWSPP
|
| |