Gene Pcal_1384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1384 
Symbol 
ID4909257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1295903 
End bp1297012 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content65% 
IMG OID640125135 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001056271 
Protein GI126459993 
COG category[C] Energy production and conversion 
COG ID[COG1149] MinD superfamily P-loop ATPase containing an inserted ferredoxin domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.794372 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCAATA GGGATAAGCC CTCCGTTGTC GTCGCCTCTG GGAGAGCCCG CCTGGCGGAC 
CTCCTCTCCA AGGCCCCGCT CTACTTCGCC TACAGGGGGC CGCACGGCGA GTGGTTTAAG
TCTGTGGCAG AGCGCCACCT AGAGGAGGCG CGTTGGGAGA GGTTGCCCCC CGCAGAGAGC
CGGGTAGCCA CTAGGCGGGA CCTCTTGACG GGGGGCTTCA TAAGGCTTAG AGACACCGTA
GTGGCGGACT CCGGCAAGTG CATCTGGTGC GGCATATGTG CCAAGGCCTG CCCCTTCTCC
GCCGTGAAGT ACGCAGAGCG CAAGTACGTG GAAGTGGACT ACGGCCTCTG CGCCGACTGT
GGGCTGTGCA ACGCGGTGTG CCCAGTGGAG GCCATTCAGA TGCCGTCGCT CCCCGACGGC
TACCTAGCCG ACTTGGTAAA GACTTCGCCG GGCTCGCTGA AGTTCATCTG TGACTACGCC
TTTGAGCTAG AGGACGAGGA GGGGGTCAGG GTGAAGTGCA TTGCCGCAAT TCCCAGGCAG
TACCTCTACC TAGCCGCGGC TAGGCACGGG GAGGCGAGTG CCCACTGCGC ACTGGGCGAG
TCATGCCCCC TGTGGCCGGC GGCGGAGAGG TGGGGACGCG GCTTGGCGCG GGAGGGTAAA
GACTTCGTGG TAAAGAGCGA GGTGAAGCCG CTAGAGCCGG GGGGCAGGTG GCAGAGCAGG
ATGTTGGCCG CCGCGGTGGG AATGCCCGTG GGCAACGTAG AGGTGCTCCA GGGGTGTACT
CTCTGTGGCG CTTGCGTCAA CGTGTGCCCC ACCGACGCCC TCTCCCTCCG GGAGTTTGAG
CTGAGGATAG TCCCCGCCCT CTGCATTGGG TGTGGGCTAT GCGCAGAGAA GTGCCCCGAG
GGCGTGATGC GGGTCTCAGA GAGCCCCAGC CCGGCGCCAT ATGAGCGTAA GACCCTCTTC
CGAGACGCCC CGGCGCGTTG CTCCTCCTGC GGCAAGTCCC TGCCCTACAC GGAGGCCGCC
GCTCGGAAGA TAGCGGAGAG GCTTAAATCG GCTGGACTGC CCCACGACCA CGTCTACTTG
TGCGAAGAGT GCCGCCTAAA GAGGCTATGA
 
Protein sequence
MINRDKPSVV VASGRARLAD LLSKAPLYFA YRGPHGEWFK SVAERHLEEA RWERLPPAES 
RVATRRDLLT GGFIRLRDTV VADSGKCIWC GICAKACPFS AVKYAERKYV EVDYGLCADC
GLCNAVCPVE AIQMPSLPDG YLADLVKTSP GSLKFICDYA FELEDEEGVR VKCIAAIPRQ
YLYLAAARHG EASAHCALGE SCPLWPAAER WGRGLAREGK DFVVKSEVKP LEPGGRWQSR
MLAAAVGMPV GNVEVLQGCT LCGACVNVCP TDALSLREFE LRIVPALCIG CGLCAEKCPE
GVMRVSESPS PAPYERKTLF RDAPARCSSC GKSLPYTEAA ARKIAERLKS AGLPHDHVYL
CEECRLKRL