| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1355 |
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| Symbol | |
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| ID | 4910305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1270206 |
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| End bp | 1271474 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640125107 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001056243 |
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| Protein GI | 126459965 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.120515 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTTGTAA TACTGATAAT TCTAGGCGTA ATTGTTGCAT GGCTTGCGTC ACAGGGCGCG
CCTCCGGCAA CTCCCACGCC TGCCCCAACT CAAACTGCCT CTCCAACTCC TACTCCGACT
CCTGCCCCGG CTAAGGTGAA GATTAGGATT TGGGGACCTT GGTCGGGGGC TGAGTATGAG
TACTTTAAGC AAGTCCTCGA CGAGTATCAG AGGCTTAATC CAAATGTGGA GTTTGAATAT
GTCACTAGGA GGGCTGAGGA TATTGCCCAA ATTCTGCCTA CTCAGCTTGA GGCTAGGCAG
GCGCCTGCCG ATGTCATTTT CACGTCTTTT GGCTGGTTTG TGGTCGAGAT GGCTAAGAGG
GGCCACCTCG TGGATTTGAC TAACGTTGTT AACGAGGCGG AGTTTGTGCC TGGGATTCTC
GACGGCGTGA AGTACGACGG CAAGATCTGG GCCGCGCCTT TTACCATGTC GTTGAAGCCG
GGCTTCTGGT ATAGGAAGTC CTTCTTCCAG AGGTATGGCC TTTCTGAGCC GCAGACGTGG
GATGAGTTTG TCCAGCTCTT GGAGAAGCTT AAGGGCGTGC AGGGCGTCAA GGCGCCCATT
GCCTCTGGCG ACGGAGTTGG GTGGCCTCTT TCCGACGTCA CTGAGGCCTT TATAATAGCG
TACGCTGGTC CCGACGTGTT TAAGGGGCTG ATTGATGGCA GTGTAAAATT CACAGACCCC
AGGGTTGTGG CCGTTTTTAG AGATAGGCTG GTGCCGCTTT TGAAGAAGGG ATACTTTGGC
GAGCCGACGG AGTGGACTGC GGCTGTGCAA CAGTGGTGGA ATGGGGAGTA TGGCATCTAC
TTCATGGGCA CTTGGATCTT GGGCATGGTG GATAACCCAG ACGATGTGGG CTTCTTCCCC
ATGCCGGAGA CTAGGGGGAT AACTGGGGGC ACTGACTACA TATTTGTGCC AAAGTACTCT
CCCAACGTGG AGGCGGCTGT GGAGTTTGTG AAGTGGCTCG CCACTAAGGG GCAGGAGGTC
CACGCCTCTA CTAAGGCTGG GAAGGTGCCG TCGTGGCTTA AGGCCGATCC CAACAAGATT
TGGCCGCCTT TGAAGGCCGT GTATGAGAAG ACTGTGGGCA AGGGCATGGT GCTTCTCCCC
GACCTTGACG ACAGCGTTGG CGGCGATTGG CAGAAGCTCT TCTGGGACCA GTTGAAGCTT
CTGTGGGTGC AGCCTGACAA GTGGCAGGAC GTTGTTAACA CCTTGGCGGC TAACTTCCCC
GCTAAATGA
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| Protein sequence | MVVILIILGV IVAWLASQGA PPATPTPAPT QTASPTPTPT PAPAKVKIRI WGPWSGAEYE
YFKQVLDEYQ RLNPNVEFEY VTRRAEDIAQ ILPTQLEARQ APADVIFTSF GWFVVEMAKR
GHLVDLTNVV NEAEFVPGIL DGVKYDGKIW AAPFTMSLKP GFWYRKSFFQ RYGLSEPQTW
DEFVQLLEKL KGVQGVKAPI ASGDGVGWPL SDVTEAFIIA YAGPDVFKGL IDGSVKFTDP
RVVAVFRDRL VPLLKKGYFG EPTEWTAAVQ QWWNGEYGIY FMGTWILGMV DNPDDVGFFP
MPETRGITGG TDYIFVPKYS PNVEAAVEFV KWLATKGQEV HASTKAGKVP SWLKADPNKI
WPPLKAVYEK TVGKGMVLLP DLDDSVGGDW QKLFWDQLKL LWVQPDKWQD VVNTLAANFP
AK
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