Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1326 |
Symbol | |
ID | 4909768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 1242842 |
End bp | 1244008 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640125077 |
Product | hypothetical protein |
Protein accession | YP_001056214 |
Protein GI | 126459936 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1030] Membrane-bound serine protease (ClpP class) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGGCTTT TCCTCGTCGC CTTGGCGCTG GCGGCCGCCC TCAAGGCGGC GGGCGTGGTG GTCGTCTACC TCGACGGGAC TGTGGACGGG ACGGCGGCTT CCCTCGTCTC GGCGGCGTTG GCTGAGGCAG AGGGGAGGGG GGTGCCCCTC CTCATCGTGT TAGACACATA CGGCGGATTT CTCCAGCCCA CCGACCAGAT AGTTGACGCC ATCCTGAGGG CCCGGGTGGA GGTGTACGCC TACGTGCCCC GGGGCGGCAA GGCCATGTCC GCGGGGGCCT TTATAGCCAT AGCCGCGGAT AGGCTCTACA TGGACCCCAC CGGCGAGATA GGCGCGGCCG AGCCCAGGCC CCCCGACCCC AAGGCGGTGA ACTACGCCGA GGGCCGCATG AGGGCCCTGG CCCAGAGGAA GTGGAACGAC AGCCGGGTAG ACGTGGCCGC GTCCTTCGTC CGCGAGAACA GAGTGCTGAC TGGGAGAGAG GCCGTGGCCC TGGGCCTCGC GGAGCCGCCC CCGCCCGGGG GATGGGAAAT CGTGGCAGAG TACAAGAGGG ACCCGCTCAT GAGGCTGTTA AACGCCTTGT CTGACCCGAC CCTAGTCGCG CTTCTCCTCC TCCTGGGGGC CGTCCTCATT GGGTACGAGC TACTCGCGGC GGGCTTCCAG GGCGTGGGGG TGGTTGGCGC CGTGTTGCTA GTCCTCGCCC TCTACCTAGT GGGGCAACTG GGCATCGACT GGCTCGTTGC GGCGTTGGCC ATCGGCGGCG CGGCGCTCAT AGCCGCAGAG GTCGTGGTTG GACACGGGGC ATTTGCCGCA TCTGGCCTAG CCATGTTTGC GCTAGCCGTC TACCTCGCGG CGGCGAGCCA GCCCTACTAC CAGGCGGGGG AGCTGGCGTA CCTCCTCGCC GGGCTGGGGG CCCTAGGGGC AGTGGCGGTG GCCTACCTGG GCTACAAGGT GAGGAAGGCC CTGAGGAGGA GGCCCTCCTA CTACGTGGAG GAGCTGAGGG GGGCTAGGGG GGTTGCCAAA ACCGCCATTG GGCCAGGCAG GCCGGGCGTC GTCTACGCCA AGGGCGAGGA GTGGACCGCC GTGTCAGACG AGGAGGTGCC GCCGGGGGCA GAGGTGGTGA TAGTGGACGT GGAGGGGCTC ACGGTAAAAG TTAAAAAGGC CGGCTAA
|
Protein sequence | MRLFLVALAL AAALKAAGVV VVYLDGTVDG TAASLVSAAL AEAEGRGVPL LIVLDTYGGF LQPTDQIVDA ILRARVEVYA YVPRGGKAMS AGAFIAIAAD RLYMDPTGEI GAAEPRPPDP KAVNYAEGRM RALAQRKWND SRVDVAASFV RENRVLTGRE AVALGLAEPP PPGGWEIVAE YKRDPLMRLL NALSDPTLVA LLLLLGAVLI GYELLAAGFQ GVGVVGAVLL VLALYLVGQL GIDWLVAALA IGGAALIAAE VVVGHGAFAA SGLAMFALAV YLAAASQPYY QAGELAYLLA GLGALGAVAV AYLGYKVRKA LRRRPSYYVE ELRGARGVAK TAIGPGRPGV VYAKGEEWTA VSDEEVPPGA EVVIVDVEGL TVKVKKAG
|
| |