Gene Pcal_1326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1326 
Symbol 
ID4909768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1242842 
End bp1244008 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content68% 
IMG OID640125077 
Producthypothetical protein 
Protein accessionYP_001056214 
Protein GI126459936 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1030] Membrane-bound serine protease (ClpP class) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCTTT TCCTCGTCGC CTTGGCGCTG GCGGCCGCCC TCAAGGCGGC GGGCGTGGTG 
GTCGTCTACC TCGACGGGAC TGTGGACGGG ACGGCGGCTT CCCTCGTCTC GGCGGCGTTG
GCTGAGGCAG AGGGGAGGGG GGTGCCCCTC CTCATCGTGT TAGACACATA CGGCGGATTT
CTCCAGCCCA CCGACCAGAT AGTTGACGCC ATCCTGAGGG CCCGGGTGGA GGTGTACGCC
TACGTGCCCC GGGGCGGCAA GGCCATGTCC GCGGGGGCCT TTATAGCCAT AGCCGCGGAT
AGGCTCTACA TGGACCCCAC CGGCGAGATA GGCGCGGCCG AGCCCAGGCC CCCCGACCCC
AAGGCGGTGA ACTACGCCGA GGGCCGCATG AGGGCCCTGG CCCAGAGGAA GTGGAACGAC
AGCCGGGTAG ACGTGGCCGC GTCCTTCGTC CGCGAGAACA GAGTGCTGAC TGGGAGAGAG
GCCGTGGCCC TGGGCCTCGC GGAGCCGCCC CCGCCCGGGG GATGGGAAAT CGTGGCAGAG
TACAAGAGGG ACCCGCTCAT GAGGCTGTTA AACGCCTTGT CTGACCCGAC CCTAGTCGCG
CTTCTCCTCC TCCTGGGGGC CGTCCTCATT GGGTACGAGC TACTCGCGGC GGGCTTCCAG
GGCGTGGGGG TGGTTGGCGC CGTGTTGCTA GTCCTCGCCC TCTACCTAGT GGGGCAACTG
GGCATCGACT GGCTCGTTGC GGCGTTGGCC ATCGGCGGCG CGGCGCTCAT AGCCGCAGAG
GTCGTGGTTG GACACGGGGC ATTTGCCGCA TCTGGCCTAG CCATGTTTGC GCTAGCCGTC
TACCTCGCGG CGGCGAGCCA GCCCTACTAC CAGGCGGGGG AGCTGGCGTA CCTCCTCGCC
GGGCTGGGGG CCCTAGGGGC AGTGGCGGTG GCCTACCTGG GCTACAAGGT GAGGAAGGCC
CTGAGGAGGA GGCCCTCCTA CTACGTGGAG GAGCTGAGGG GGGCTAGGGG GGTTGCCAAA
ACCGCCATTG GGCCAGGCAG GCCGGGCGTC GTCTACGCCA AGGGCGAGGA GTGGACCGCC
GTGTCAGACG AGGAGGTGCC GCCGGGGGCA GAGGTGGTGA TAGTGGACGT GGAGGGGCTC
ACGGTAAAAG TTAAAAAGGC CGGCTAA
 
Protein sequence
MRLFLVALAL AAALKAAGVV VVYLDGTVDG TAASLVSAAL AEAEGRGVPL LIVLDTYGGF 
LQPTDQIVDA ILRARVEVYA YVPRGGKAMS AGAFIAIAAD RLYMDPTGEI GAAEPRPPDP
KAVNYAEGRM RALAQRKWND SRVDVAASFV RENRVLTGRE AVALGLAEPP PPGGWEIVAE
YKRDPLMRLL NALSDPTLVA LLLLLGAVLI GYELLAAGFQ GVGVVGAVLL VLALYLVGQL
GIDWLVAALA IGGAALIAAE VVVGHGAFAA SGLAMFALAV YLAAASQPYY QAGELAYLLA
GLGALGAVAV AYLGYKVRKA LRRRPSYYVE ELRGARGVAK TAIGPGRPGV VYAKGEEWTA
VSDEEVPPGA EVVIVDVEGL TVKVKKAG