Gene Pcal_1314 details

Gene Information

• Locus tag: Pcal_1314
• ID: 4910067
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 1231962
• End bp: 1232636
• Gene Length: 675 bp
• Protein Length: 224 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 640125067
• Product: methyltransferase type 11
• Protein accession: YP_001056204
• Protein GI: 126459926
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 22
• Fosmid unclonability p-value: 0.490863
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGGCGCCG GGGGGTCTGT GGCCCGCGAC CTCTTCGACA AGCTGGCGAG GCGGTACGAC 
GAGTGGTACA TAAGACACCG CGACCTCTAC CGCGCCGAGC TTGAGGCAGT GGCGGCGCTG 
GGCTGCGCGG GCGGGGTGGA GGTGGGGGTT GGGTCTGGCC GATTCGCCGG GCCGCTGGGC 
CTCCGGGCCG GGGTCGACGT GAGCCGCGGC ATGTTGAAGC TGGCGCCGCG GGAGTTAGAC 
CTAGTGGAAG CAGCCGCCGA GTCGCTCCCC CTCCGCCGAG GCGCCTACCC CTGCGCCCTC 
TTCGTCGTAA CTCTCTGCTT CCTCCAAGAC CCAGCCAAGG CTCTCGCAGA GGCGGCGGAG 
GCCGCGGAGA GGGTAGTGGC GTGTATTGTG CCAAGGGGCT CCCCCTGGGG GCTCTACTAC 
GTGGCCCAAG CCGCCGCCGG CCACCCCTTC TACTCCCACG CCAAGTTCTA CACCGTGGCA 
GAGGTGGTGG AGATGGCCAA GGCGGCGGGC CTGACCCCGG CCAGGGCGGT GGCTGCGCTG 
GAGGGAGGCC CCCCCGGCGG GTACGAGAGG CCGCGACCCG TGTCGCTTGA GGAGGCTGAG 
CGATACGGCT TCGCCTGCGT GGAGTTTATA AAGAGAAGCC GAGAGGGGCG GCATGAAGGT 
GGCGGCCGCC ACTAG 

 

Protein sequence

MGAGGSVARD LFDKLARRYD EWYIRHRDLY RAELEAVAAL GCAGGVEVGV GSGRFAGPLG 
LRAGVDVSRG MLKLAPRELD LVEAAAESLP LRRGAYPCAL FVVTLCFLQD PAKALAEAAE 
AAERVVACIV PRGSPWGLYY VAQAAAGHPF YSHAKFYTVA EVVEMAKAAG LTPARAVAAL 
EGGPPGGYER PRPVSLEEAE RYGFACVEFI KRSREGRHEG GGRH