| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1245 |
|---|
| Symbol | |
|---|
| ID | 4909136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | + |
|---|
| Start bp | 1158993 |
|---|
| End bp | 1159349 |
|---|
| Gene Length | 357 bp |
|---|
| Protein Length | 118 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640124998 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001056135 |
|---|
| Protein GI | 126459857 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.603564 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAGTCA ACCTCCTCGG AGTCGGGGTG TTGCTTCTAG GCGTGGCCGC CGTGGTGGCA
GTCGGCATTG TTCTACACGC ATACTTCACG ATGCAGATGT CCTACCGTCC CCCGCCTCCC
TCGCCGTTTA CAGCCTACTG CCGCAACTCG GTCGTGGTGA TAAGCGCCTA CGAAGATTTG
ACAAATGTCC AAGTGCTAGA CGTCAACGGC ACTGCTGTAT GCGCCTTCGA CAAAATAGGG
AGGGGCTCCG ACGAGGTATG CAGAGCGAGG GGACCGGGCA TCTACTTGAT AGTAGCCGGC
GGATTTAAGA AGGCGGTGGA CTGCGTGCCT CCGCCAGCGC CGAGCCCGGC GGACTGA
|
|---|
| Protein sequence | MGVNLLGVGV LLLGVAAVVA VGIVLHAYFT MQMSYRPPPP SPFTAYCRNS VVVISAYEDL
TNVQVLDVNG TAVCAFDKIG RGSDEVCRAR GPGIYLIVAG GFKKAVDCVP PPAPSPAD
|
|---|
| |