Gene Pcal_1189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1189 
Symbol 
ID4909361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1103793 
End bp1105037 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content64% 
IMG OID640124943 
Productmolybdenum cofactor synthesis domain-containing protein 
Protein accessionYP_001056080 
Protein GI126459802 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0303] Molybdopterin biosynthesis enzyme 
TIGRFAM ID[TIGR00177] molybdenum cofactor synthesis domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGTGC GCGGCTTCAA GCAGCTCACC CCCATACCAG AGGCCCAAAG GGCCGTGCTG 
GCCGCCCTGA CCCACGTCCC CAGAGCCGCC GCCGTGCCGA CCCCCACCGC CGTGGGCAAA
TACGCCGCCG CAGACGTGGT GGCACCGGCG GACGTGCCCC CCTTTGACAG AGCTGCCTTC
GACGGCTACG CGGTGAGGTC CATCGACACC CTAAGCGCGT CTAGGACAAA CCCCGCTATG
TTGAAGCTGG TGGGCAAGGC ACTTCCGGGG CGCCCCCACC AAGGCGCATT GGGCCCCGGC
GAGGCCGTAG AAGTGGCGAC GGGCGCCCCC CTCCCTCCAG GCGCAGACGC CGTTGTGCCA
TACGAAGAGG CCGCCGCCAG GGAGGGATAC GTGGAGGTGT ACAGACCGGT CCCCCAGTAC
TACTACGTCT CGCGGCGGGG AGAAGACGTG GTGGCAGGCG AAGTGGTCAT ACGCAGAGGC
CGGCTCATAA AGCCGTGGGA CATCGGCGTG TTGGCCTCCC TAGGCATAAA AGAGGTGCCG
GTCTACAAAA TAACCGCGGC CATTATTTCC ACAGGCAACG AGCTCGTGGA GTTGGACGAC
GCCCCACCGC CCCCCGGCAA GATCATAAAC AGCACCCGCC ACGTGCTAGA GGCCATGTTG
AGGGAGGTGG GGGTGGAGCC CCACTACATG GGCATAGTCC CAGACGACGA AGACGTGATA
TACGAGAGAG TCAGAGAGGC GCTGAGGGAG CACGACATGG TCATAACCAC GGGCGGCGTC
TCCGTGGGAG AGCCAGACCA CGTAGTCTCC GCGGTGTCGA GGCTGAGGCC CAGCGTCCTC
GTCCACGGCA TAGCGGCGAG GCCCGGGAGG CCCAACAGCG CCGCGGTAGT GGAGGGAAAG
CTTATCGCAA TGCTCTCGGG CTTCCCCGTG GCCTCCATCG TCGGGTTCGA GGTCTTTGTA
AAACCCGCCG TCCTAAAAAT GGCGGGGGCG GCGGAGGAGC CCCGCCCAGT AGTCAAGGCG
GTTTTGACCA GGAGAGTCAC CACCCCCATC AACGTGAGGA GCTTCGTCAG AGTCCGCGTC
TATAGACAGG GCGGAAGACT CTACGCAGAG CCCCTAGCCG TGACTGGTAG CGGCATACTC
TCCACATTGA CGAGGGGAAA CGGCCTCTTA ATCATACCCG AAAACAGAGA GGGATACGAC
GAGGGCGACG AGGTGGAGGT AGTACTGTTG GGACCCATAG AGTAG
 
Protein sequence
MGVRGFKQLT PIPEAQRAVL AALTHVPRAA AVPTPTAVGK YAAADVVAPA DVPPFDRAAF 
DGYAVRSIDT LSASRTNPAM LKLVGKALPG RPHQGALGPG EAVEVATGAP LPPGADAVVP
YEEAAAREGY VEVYRPVPQY YYVSRRGEDV VAGEVVIRRG RLIKPWDIGV LASLGIKEVP
VYKITAAIIS TGNELVELDD APPPPGKIIN STRHVLEAML REVGVEPHYM GIVPDDEDVI
YERVREALRE HDMVITTGGV SVGEPDHVVS AVSRLRPSVL VHGIAARPGR PNSAAVVEGK
LIAMLSGFPV ASIVGFEVFV KPAVLKMAGA AEEPRPVVKA VLTRRVTTPI NVRSFVRVRV
YRQGGRLYAE PLAVTGSGIL STLTRGNGLL IIPENREGYD EGDEVEVVLL GPIE