Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1171 |
Symbol | |
ID | 4909189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 1091553 |
End bp | 1092440 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640124925 |
Product | putative deoxyhypusine synthase |
Protein accession | YP_001056062 |
Protein GI | 126459784 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1899] Deoxyhypusine synthase |
TIGRFAM ID | [TIGR00321] deoxyhypusine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGGAAG TCGTCGAGTT GTACAAGAGG ATAGGGGGTT TTCAGGCGCT ACACGTCGCC CAAGCCTACG AAGTTCTAAA GGAGGCGCTG GGCGAGGCAG ACGTGCGTTT TTTCTCCTTC ACTGGCAACC TAGTGGCCAC GGGGCTTAGG GAGATTATAG CCGAGGCTCT GAGGGAGAGA CTCTTCAACG TGGTCGTCAC TACCGCCGGC GCCTTAGACC ACGACATAGC CAAGGCCATG GGGGCCTCCT ACAGGCCCGG CTCCTTTGAC TTAGACGACT ACGAACTGGC CGAGAAGGGG CTTCACAGGC TTGGAAACGT GGTGATTAGC AGAGAGGAGT ACGGCCCGTA CGTGGAGAAG TTTGTGCTTC AGAGGTGTGA AAGGCTGTGG GGGAGGTCGC TGGCCACCTA CGAGCTGGCC GAGGAGTTTG GGAGAGATCT CCCTGAGGAC TCCATACTCG GCGCGGCGGC CAGGGCGGGG GTAAAGGTCT TTGTCCCCGG CATCGTCGAC GGCGCCGTGG GGACCGCCTT GCTCACTTGC AACGACTTGG CGAGGGTCAG GAGAGGCGGG GCGAGGCTTG TGGTAGACGT GTTAAAGGAC GAGGAGGCCC TCAGGGAGAT TGTGCACGGG GGCAAGAGGC TGGCCGCGCT CATCGTCGGC GGGGGCATCA GTAAACACCA CGTAATTTGG TGGGCACAGT TCAAGGGCGG CCTCGACTAC GTTGTTTACA TCTCCACGGC TGTTGAATAC GACGGCTCTC TAAGCGGCGC CCGGCCGAGG GAGGCGGTGA GCTGGGGGAA GGTCAAGCCC ACGGCTAAGA GCGTGTACGT CTACGCCGAT GCGACCCTCG TACTGCCCAT ACTTCTAAAG GCGCTATGTG GCAAATAG
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Protein sequence | MREVVELYKR IGGFQALHVA QAYEVLKEAL GEADVRFFSF TGNLVATGLR EIIAEALRER LFNVVVTTAG ALDHDIAKAM GASYRPGSFD LDDYELAEKG LHRLGNVVIS REEYGPYVEK FVLQRCERLW GRSLATYELA EEFGRDLPED SILGAAARAG VKVFVPGIVD GAVGTALLTC NDLARVRRGG ARLVVDVLKD EEALREIVHG GKRLAALIVG GGISKHHVIW WAQFKGGLDY VVYISTAVEY DGSLSGARPR EAVSWGKVKP TAKSVYVYAD ATLVLPILLK ALCGK
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