| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1170 |
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| Symbol | |
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| ID | 4909062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1090615 |
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| End bp | 1091565 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640124924 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001056061 |
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| Protein GI | 126459783 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGCAAA TAGCCCTGGC CTTCTTTGGG GGCGTGGCCT TTGGGTGGTG GTGGGTTAAA
TACCAGAGGG CAGCGGGCAT CACCTCCCGC GACGTCTATA AGGGCATAGA CGGCGTGCCG
AAGGCGGGGG GGCTTATGGC AGTGGTGGGG GCCGCCCTGG GCTACCTGGC GCTTGCCCCC
CAGATCCCAG AGGCTCTGCT CGTCTTCATC GCGGCGCTTA TAATCGGCAT GTTGGGCCTC
TGGGACGACT TGAGGGGGGT CAGCGAGTAC GTGAGAGTGT TTGTGCCGCT CCTCGTGGCG
CTTGTGGTGG CCAGGGCCCT TGGCGAGGTG AGACTCACCC TCCCCCTGGT GGGGCTGTTC
TACGGCGCCA CCGGCTGGTT TTCAGTGCTG GCGATCCCGG TGGTGACAAA TGCCTTCAAC
ATGTTGGACC CAGTAAACGG CTTTTTGCCC ATGGCAAACG TGGCGGTGGC CCTCGCCTTA
GCCGCCGTGG CGTATGTCAG AGGCGACTTA GGCGCCGTAA TGCTGTTGTT AGTCCACGCA
GCGGCCGCGG CGGCGCTCTA CGTCTACAAC AGGTACCCCG CCAAGACCTT CAACGGTAAC
GTGGGTAGCT ACTTCCTGGG CGCCAGCATT TCCACGGTAG CCGTGGTGTA CGACCTAGTG
GCCTACCTAG TGCTCGCGGC TCTCCCGTTT ATTACAAACG GCGTGTTGAT AATCTTCTCC
TCGGGCGGCA TAAAGGGGCG TGAGAAAATC CAGAGGCCCA CAAGGGTGGA GGGCGGGGTG
GTGCAACAAG ACTGCTCCTC CCCCATAGTC TCTCTGGTTA GGCTGGCAGT CTCGGAGAGG
GCCATGTCGG AGTATGAGAT ATTTAAGGCC CTGACTCTGG CTGTGTTGAC CACTTCCCTC
CTAACGGCGG CGCTGGCGTT TATGCTACGT GCATACTCGC TACCGGTATG A
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| Protein sequence | MWQIALAFFG GVAFGWWWVK YQRAAGITSR DVYKGIDGVP KAGGLMAVVG AALGYLALAP
QIPEALLVFI AALIIGMLGL WDDLRGVSEY VRVFVPLLVA LVVARALGEV RLTLPLVGLF
YGATGWFSVL AIPVVTNAFN MLDPVNGFLP MANVAVALAL AAVAYVRGDL GAVMLLLVHA
AAAAALYVYN RYPAKTFNGN VGSYFLGASI STVAVVYDLV AYLVLAALPF ITNGVLIIFS
SGGIKGREKI QRPTRVEGGV VQQDCSSPIV SLVRLAVSER AMSEYEIFKA LTLAVLTTSL
LTAALAFMLR AYSLPV
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