| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1083 |
|---|
| Symbol | |
|---|
| ID | 4909972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | - |
|---|
| Start bp | 1017321 |
|---|
| End bp | 1017725 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640124835 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001055974 |
|---|
| Protein GI | 126459696 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACACG AATCTGTGCC AATCTACTGG AGGAACATCC CCCAGTACTA CCGCCTTGTC
GCCAAGAAGT GCAAAAAGTG CGGAGCCGTG TACTTCCCGC CAGCGGCAAA GTGCAAGTGC
GGATCCACGG AGCTGGAGGA CTACGAACTT CCACGCGAGG GCCGCCTCGT GGAATACACA
GTCTTGTACC AAGTGGGGAC AGACTTCTTG AAACAGAAGC CGCTCGTGTT AGGCCTAGTG
GAGCTAGACG GAGGCGTGAA GGTCAGCGGG CAAATTGTAG ACGCGCGGCC CGAGAGGCTC
AAGCCGGGGG TCAAAGTGGA GGTGGTGTTC AGACGCGTCG TAGTCGACGG GAAACACGGC
CTCGTCATGT ACGGCTACAA GTTTAGGCCA GTGGAGAGGC CATGA
|
|---|
| Protein sequence | MKHESVPIYW RNIPQYYRLV AKKCKKCGAV YFPPAAKCKC GSTELEDYEL PREGRLVEYT
VLYQVGTDFL KQKPLVLGLV ELDGGVKVSG QIVDARPERL KPGVKVEVVF RRVVVDGKHG
LVMYGYKFRP VERP
|
|---|
| |