Gene Pcal_1056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1056 
Symbol 
ID4909342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp996189 
End bp996503 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content47% 
IMG OID640124808 
Producthypothetical protein 
Protein accessionYP_001055947 
Protein GI126459669 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0815321 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTTTT CCCTCTCAGT AGTCGACATC ACAAGCGACT TTCCCAACGT AATAAAGCTC 
AGCGGAGATG TGGAGGCCAC TGTAGAGCTA CCTCTGGAGA AGTTAGGCGT TGCACTTAAG
AAAGGCGATA AGATACGCCT AGTACTAAGC AAAGAAAAAG ACGGAGACCT CTCCAAATAC
AAGGTGTACA TGTGGGGTAT TGTCTACCAC GTCGCAGAGG AACTCACGCG AATATCCATT
GGCGGGTTGC AACTGGACAT TAAGAAGAAG CTCCCCCTAG CAATAGGCGA AAAGGTATAC
ATAGGAATTC TCTAA
 
Protein sequence
MEFSLSVVDI TSDFPNVIKL SGDVEATVEL PLEKLGVALK KGDKIRLVLS KEKDGDLSKY 
KVYMWGIVYH VAEELTRISI GGLQLDIKKK LPLAIGEKVY IGIL