| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1049 |
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| Symbol | |
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| ID | 4909122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 987870 |
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| End bp | 990221 |
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| Gene Length | 2352 bp |
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| Protein Length | 783 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640124801 |
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| Product | DNA polymerase II |
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| Protein accession | YP_001055940 |
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| Protein GI | 126459662 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
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| TIGRFAM ID | [TIGR00592] DNA polymerase (pol2) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0144376 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGTTTT GGCCTCTAGA CGCCACGTAC TCTGTGGTTG GCGGGGTGCC TGAGGTGAGG
GTCTTCGGCG TCGACGGCGA GGGTCGGAGG GTTGTTCTCG TCGATAGGCG TTTTAGGCCG
TACTTCTACG CCAAGTGTGA CAAGTGCGAC GCCTCTTTGG CCAAGTCGTA TCTTTCCCGT
GTGGCTCCTG TGGAGGCCGT GGAGGTGGTG GAGCGGCGGT TTTTCGGCAG GCCCACGATC
TTTCTAAAGG TGGTGGCTAA GGTGCCTGAG GATGTGCGGA AGTTGCGGGA GGCGGCCTTG
GGAGCCCCCG GCGTCGTAGA CGTGTACGAG GCCGATATTA GGTACTACAT GCGTTACATG
ATAGATAAGG GAGTTGTCCC CTGCGCTTGG AACGTGGTAG AGGCGAGAGA GGCGGGCAAG
CTCGGCCCTC TGCCGTTGTA CGAAGTTGTG GAGTGGGCCG GCGTTGAGGA GGGCTTTCCG
CCCCCTCTTC GCGTCTTGGC CTTCGACATA GAGGTGTACA ACGAGAGGGG GAGCCCAGAC
CCGCTTCGCG ATCCCGTGGT GATGCTCGCT GTCAAGACCA GCGACGGCCG CGAGGAGGTC
TTCGAGGCGG AGGGCAGAGA CGACAGGAGG GTCATTAGGG GGTTTGTGGA TTTTGTAAAA
GAGTTTGACC CCGATGTAAT AGTTGGCTAC AACTCCAACG GCTTTGACTG GCCTTACCTC
TCCGAGAGGG CTAAGGCGTT GGGTGTTCCG CTGAGGGTGG ATAGGCTGGG CGGCGTGCCT
CAGCAGAGTG TCTACGGCCA CTGGTCTGTG GTAGGCAGGG CGAACGTCGA CTTGTACAAC
ATAGTGGACG AGTTTCCAGA GATTAAGGTG AAGACTCTGG ACCGCGTGGC TGAGTACTTC
GGCGTCATGA AGAGGAGTGA GCGCGTGTTA ATACCTGGCC ACAAGGTGTA TGAGTATTGG
AACGACCCTG CGAAGAGGCC CACGCTTATG CGCTACGTCC TCGACGACGT TAGATCCACT
CTGGGCCTCG CCGAGAAGCT TCTCCCATTC TTAATCCAGC TCTCCTCCGT GTCTGGACTG
CCGCTCGACC AAGTGGCCGC GGCCAGCGTT GGGAATAGAG TGGAGTGGAT GCTTTTGCGC
TACGCCTACC GCATGGGCGA GGTGGCGCCG AATAGGGAGG AGAGGGAGTA CGAGCCTTAC
AAGGGGGCGA TTGTGCTAGA GCCAAAGCCC GGGCTGTACA GCGACGTGCT TGTGTTAGAC
TTCTCCTCAA TGTACCCCAA CATAATGATG AAGTACAACC TCTCGCCCGA TACTTACTTG
GAGCCGCATG AGCCAGATCC CCCGGAGGGG GTAGTGGTGG CGCCCGAGGT GGGGCACCGC
TTTAGAAAGG CTCCAACCGG CTTTATCCCC GCCGTGTTGA AGCACTTAGT GGAGCTTAGA
AGGGCGGTTA GAGAGGAGGC GAAGAAGTAT CCCCCCGACT CGCCTGAGTA CCGACTCTTG
GACGAGAGGC AGAGGGCTCT CAAGGTCATG GCAAACGCCA TGTACGGCTA CTTAGGCTGG
GTTGGTGCGC GGTGGTACAA GAAAGAGGTC GCGGAGTCCG TTACGGCGTT TGCGCGGGCC
ATTCTACTCG ACGTGGTGGA GTACGCGAAG AGGCTTGGCA TCGAGGTGAT ATACGGCGAC
ACGGACAGCC TCTTCGTTAA GAAGAGCGGG GCGGTGGACA GGCTGGTGAA ATATGTGGAA
GAGCGGCACG GCATTGAGAT TAAGGTGGAT AAGGACTATG AGAGAGTGTT GTTTACTGAG
GCTAAGAAGA GGTACGCCGG GTTGTTGAGA GATGGGAGAA TAGACATCGT GGGGTTTGAA
GTAGTTAGGG GGGACTGGTG CGAGTTGGCC AAGGAGGTCC AGCTGAACGT GGTGGAACTT
ATTCTTAAGT CGAAGAGCGT GGGCGAGGCC AGGGAGCGGG TTGTGAAATA TGTCCGCGAA
GTAGTTGAGC GCCTAAAGGC GTATAAATTC GACTTAGACG ACTTGATCAT CTGGAAGACG
TTGGACAAGG AGCTGGATGA GTACAAGGCC TATGGCCCCC ACGTCCACGC CGCGTTGGAG
CTTAAGAGGA GGGGCTACAA AGTGGGTAAG GGGACCACTG TGGGGTATGT GATAGTGAGG
GGGCCCGGCA AGGTTTCTGA ACGCGCCATG CCCTACATAT TCGTCGACGA CGCGAGTAAA
GTGGACGTGG ACTACTACAT TGAGAAGCAA GTTATCCCAG CCGCGCTCAG AATAGCAGAG
GTCCTCGGCG TAAAAGAGAG CGACTTGAAG ACAGGCAGAG TCGAAAAATC ACTCTTGGAC
TTCCTAGGCT AG
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| Protein sequence | MRFWPLDATY SVVGGVPEVR VFGVDGEGRR VVLVDRRFRP YFYAKCDKCD ASLAKSYLSR
VAPVEAVEVV ERRFFGRPTI FLKVVAKVPE DVRKLREAAL GAPGVVDVYE ADIRYYMRYM
IDKGVVPCAW NVVEAREAGK LGPLPLYEVV EWAGVEEGFP PPLRVLAFDI EVYNERGSPD
PLRDPVVMLA VKTSDGREEV FEAEGRDDRR VIRGFVDFVK EFDPDVIVGY NSNGFDWPYL
SERAKALGVP LRVDRLGGVP QQSVYGHWSV VGRANVDLYN IVDEFPEIKV KTLDRVAEYF
GVMKRSERVL IPGHKVYEYW NDPAKRPTLM RYVLDDVRST LGLAEKLLPF LIQLSSVSGL
PLDQVAAASV GNRVEWMLLR YAYRMGEVAP NREEREYEPY KGAIVLEPKP GLYSDVLVLD
FSSMYPNIMM KYNLSPDTYL EPHEPDPPEG VVVAPEVGHR FRKAPTGFIP AVLKHLVELR
RAVREEAKKY PPDSPEYRLL DERQRALKVM ANAMYGYLGW VGARWYKKEV AESVTAFARA
ILLDVVEYAK RLGIEVIYGD TDSLFVKKSG AVDRLVKYVE ERHGIEIKVD KDYERVLFTE
AKKRYAGLLR DGRIDIVGFE VVRGDWCELA KEVQLNVVEL ILKSKSVGEA RERVVKYVRE
VVERLKAYKF DLDDLIIWKT LDKELDEYKA YGPHVHAALE LKRRGYKVGK GTTVGYVIVR
GPGKVSERAM PYIFVDDASK VDVDYYIEKQ VIPAALRIAE VLGVKESDLK TGRVEKSLLD
FLG
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