| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0917 |
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| Symbol | |
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| ID | 4909955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 872550 |
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| End bp | 874601 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640124665 |
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| Product | Alpha-glucosidase |
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| Protein accession | YP_001055808 |
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| Protein GI | 126459530 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1501] Alpha-glucosidases, family 31 of glycosyl hydrolases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTTGAGC TAGGGAAGAA GAGCGTAAGG CTAAGGCTGG GGGAGCAATT TCTCTCTTTT
CCCCTCCCCC AGGGCGAGCC CAAGCCCTCG GCCGAGTTCG ACGGGAGGGC TCTCAAGGCG
TCTTGTTGCG GCATAGAGGT GGAACTAGCC GTGGAGGCGC GGCTTGGGTC GACCACTGTC
CGCAAGAGGC TTGGGCTCCA CGAGCACGTG TTGGGCTTGG GCACTAGGGC CTACCCCGTG
GATAGGCGCC GTGGGCGGTT TCAGCTCTTC AACAACGACT TGTACGCATA CCAGCTCGGC
ATGGACCCAC TCTACGCGTC GATACCCTTC ATGGTGTTTG TTGAGGGGGG CAGGGCGTAC
GGCCTAGTGG TCAACAGCCC GGCCTATGGC TTTGTCGACG TGGGGCGCGA GAGGTACAGC
GAGGTGGTGG TCTACGTGGA GGACTTGCCC GAGTTGTACA TACTTTTTGG CCCCGCGCCG
CTGGACGTCT ACGGCCTATA CAGCGAGGTC ACCGGCATGC CCTTCCTCCC GCCGAAGTGG
GCCCTCGGGG TGCACCTCTC CCGGTACAGC TACGAGCCGC ACGACGCGGC GAGGGAGGTG
GTGAGAGAGG TGTCCTCACT GGTCCCAGTG GACGCGGTAT ACCTCGACAT AGACTACATG
GACAAGAGGA GGCCCTTTAC TTGGGACGTG AGGAAGTTCC CCCCGAGCTT TGTGGAAGAG
ATGCACGAGG CGGGGGTCAG AGTGGTGGCG ATACTCGACC CCTACATAAA GGCCGAGCCG
GGCTACAATC CCTTTGAAAA GCTGTTGCAC TGCCTCCTAG TGACTGAGAA CGACGAGCTT
TTCCTAGCCC AGGGGTGGCC GGGCCTCTCC GCCCTGCCCG ACTTCTTAAA CCCCCGCTGT
AGAGAGCTGT GGGCTGAGCT AGTGGCAGAC TTCGTTAAGA CCTACGGCAT AGACGGCATT
TGGCTAGACA TGAATGAGCC CACGGTCTTC AACTGTGACA TACCAGCGAC GAGGAGTAGG
ATATACGCCT TGGCGGGGGC GACGCCGCAC GGGCTCGCCC GGGAAGAGCT GTTCTGCAAG
GCGCCCCGCG GCGCCTACCA CGTGGTAGGC GGGGTCAAGG TGCCCCACGA GAAAGTGCGT
GGCCTCTACC CCTACTACGA GGCAGAGGCC ACCTACAAGG CCCTAGAGGC GGCTGGCAGA
CAGCCCTTCA TTCTCTCCCG CTCAGGGTAC CTCGGCATAC AGCGCTACGC CGCGCTTTGG
ACAGGCGACG TCCCCAGCAC GTGGGAGGGG CTGAGGCTGA CGCTAATGGC CGTCCTAGGC
CTCTCCGCAT CCGGCGTCCC CTTCGTGGGG TGTGACGTGG GGGGCTTCGC CGGCATCGGC
GACTACGAGC TCATAGCCAG GTGGTACCAA GCCGCCGCGC TCTTCCCCAT ATTCCGCATC
CACAGAGACA AGGGGGCCAC AGACGCTGAG CCCACGCAGC TCCCGGCCAA GTACAGGCAG
ATGGCCGTTG ACGCAGTTAG GCTGAGGATG AGACTTCTCC CATACCTCTG GCACCTCGCC
CACGAGGCCC ACCTCGCCGG CCGCCCCATC GTGAGACCCC TCGGGGTGGA GTTCCCAGAC
GACGAAGACG CCTTTAAGAT AAACGACGAG TACATGGTGG GGTCCCACCT GCTCTACGCC
CCCATCGTGG ACAAAGGCGC CATGCGCAGA GACGTATACT TGCCCAGAGG CGTCTGGATA
GACGCGGCCA CAGGGAAAAC CCACCTAGGC CCCAGCTGGA CGACCTCGGA GGCCGACATG
CCGCTCTACG TTAGGGCAAA CTCGGCCGTG CCCACCAGCG ACGGCCTGTG GATATTCGGC
GAGGGAAAGT GGACCATTTA CACAGACGAG GGGGCGGTCG CCGTCTCCAG GCGGGGCAAC
GCGGTGGAGC TAGGCGGGGC GTGGCGCTCA GTGCACATAC TCGGCGAGTG GCTAGAAGAG
GTGGTGGTCA ACGGAGAGAG GCACAAAGCT GTTCACACAA GGCTCGGCAC ATACGTCTCC
ATAAGTCACT AG
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| Protein sequence | MLELGKKSVR LRLGEQFLSF PLPQGEPKPS AEFDGRALKA SCCGIEVELA VEARLGSTTV
RKRLGLHEHV LGLGTRAYPV DRRRGRFQLF NNDLYAYQLG MDPLYASIPF MVFVEGGRAY
GLVVNSPAYG FVDVGRERYS EVVVYVEDLP ELYILFGPAP LDVYGLYSEV TGMPFLPPKW
ALGVHLSRYS YEPHDAAREV VREVSSLVPV DAVYLDIDYM DKRRPFTWDV RKFPPSFVEE
MHEAGVRVVA ILDPYIKAEP GYNPFEKLLH CLLVTENDEL FLAQGWPGLS ALPDFLNPRC
RELWAELVAD FVKTYGIDGI WLDMNEPTVF NCDIPATRSR IYALAGATPH GLAREELFCK
APRGAYHVVG GVKVPHEKVR GLYPYYEAEA TYKALEAAGR QPFILSRSGY LGIQRYAALW
TGDVPSTWEG LRLTLMAVLG LSASGVPFVG CDVGGFAGIG DYELIARWYQ AAALFPIFRI
HRDKGATDAE PTQLPAKYRQ MAVDAVRLRM RLLPYLWHLA HEAHLAGRPI VRPLGVEFPD
DEDAFKINDE YMVGSHLLYA PIVDKGAMRR DVYLPRGVWI DAATGKTHLG PSWTTSEADM
PLYVRANSAV PTSDGLWIFG EGKWTIYTDE GAVAVSRRGN AVELGGAWRS VHILGEWLEE
VVVNGERHKA VHTRLGTYVS ISH
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