Gene Pcal_0902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0902 
Symbol 
ID4909879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp859103 
End bp860125 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content56% 
IMG OID640124650 
Producthypothetical protein 
Protein accessionYP_001055793 
Protein GI126459515 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGAGGA TCAAGGTCTC GTTTGCCGGC CTTGAGGTTG AGTTTGTGGA TAGGGAGAGG 
GCTCTGGAGC AGGTCAGAGA GTTTGGCGAG CGCGGGACTT TCCCGGTCTA TGTCGTGTAT
GGGCCAGAGG GGTGTGGAAA GACGGCGTTT TTGAAACAAG CTAAGGCCAT CCTAGAGGAG
GAGTATGGGT ATCACGTCGT TTATGCAAAT CCCCTGGCCA AAAAAGCCGA GGAGGTCCTT
CAGTACTCGC CGTCTGCAGA AGGCATAGTC AAAGAAGTCC TTAGCGCGAC GCCGGACCCG
TGGGGCAAGA TGGTAGATGT CACAATAGCC GTCGCCGGCT GGATTATGAA GAGGCTTAGA
AGATCGAGAG TGGCCGTGTT GATGGACGAC ATATTTCAGG CGGTGGGTGT GGAAAACGCA
GAGGCGTACG TCAAAGCCCT ACTCAACCTC ATTGAGTGGC CACCCGCCGA ATACGACAGA
GTAGTAGTGC TAGTGGCGTC GAGTGAAGGC GTCACGAGGG AGAGGGTGGG GAGGCACAGT
TGGGCGACGA TCAAGGTTAT GTGGAATATG GCTAGGGAGG GCTTCCGCCA ACTATACGAG
CAACTCCCGG GGCCAAAGCC TCCCTTCGAC GAAGTGTGGA GGCTGACGGG GGGCAATCCG
AGGTACCTCG AAAATTTCTA CAAGGTTGGG TGGGGGGTGG AGGAAGTAGT GGCGGCGTTG
GGGGGCGGTA AAGGGCTTGT GGGGTTCGTA TACTCTCTGT CTGACGTGGA GAGGCAGATT
CTTGAGGAGG CCGTCGAAGA CCCAGACGTC CTCTTGAAGA GGTACAGGGA GGCTAAGAGC
CTAATAAGCC AGCTTACTGA GAAAAACCTC ATAATAGAGA TAGGGGACCG CAAGCCGTTT
CTCTGGATTG ACCAGCCGCC GCCCGAGAGA GACCCAGAGC TGGGCATCGG CCGCTACTTT
GCGTGGCAGA CCCCTCTGCA CAGAGAGGCT GTGAGGAGTG CGCTGGAGGT TACGAGGAAG
TAA
 
Protein sequence
MKRIKVSFAG LEVEFVDRER ALEQVREFGE RGTFPVYVVY GPEGCGKTAF LKQAKAILEE 
EYGYHVVYAN PLAKKAEEVL QYSPSAEGIV KEVLSATPDP WGKMVDVTIA VAGWIMKRLR
RSRVAVLMDD IFQAVGVENA EAYVKALLNL IEWPPAEYDR VVVLVASSEG VTRERVGRHS
WATIKVMWNM AREGFRQLYE QLPGPKPPFD EVWRLTGGNP RYLENFYKVG WGVEEVVAAL
GGGKGLVGFV YSLSDVERQI LEEAVEDPDV LLKRYREAKS LISQLTEKNL IIEIGDRKPF
LWIDQPPPER DPELGIGRYF AWQTPLHREA VRSALEVTRK