| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0839 |
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| Symbol | |
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| ID | 4908840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 798593 |
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| End bp | 800326 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640124588 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001055731 |
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| Protein GI | 126459453 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAAAGG AAGTATTTGA AAAATATATT GCAACGAGGA TATGGGCTAA GAACTACGAC
GAGGGGGTCC CCCCCGAGGT TCAAATTAAG CCAGAGCCCC TCTTCTCCTA CTTAGACAGA
CAAGCCGCAG AGAGGGGGAG CGCAACGGCG TATGTGTACT TCGGCAACAA GATAAGCTTC
AAGACGGTGG GAGACCACAG CGATAGGGTG GCAGCGGCGC TCAAGGAGTG GGGGCTAGGC
AAAGGTGACG TCGTTGCGCT ATATTTGCCT AATACGCCTG CCTTTCCGAT TATTTACTAC
GGCGCCTTGA AAATAGGCGC AGTGGTAAGC CCCATGAACC CCATGTATAC CCCAAGAGAG
GTGGCGTACC AAGCCAAAGA CGCTGGGGCC AGAGTCATCT TCGTGGCCGA CGTGTTGTAC
AAAAACGTGG AAGAGGCCGA CAAGATGCAC AAGTTCGACC GCGTGGTGGT AGTAGAAGTG
GCCGAGTACA TGCCGGCCTT TATCAAGCCG CTAGCAAAAA GGCGGCTAAA GCCCCCAAAA
ATCCCCTATG GGGGACGCAT CGTGTCCTAT AAGTCTCTGC TATCCCACAA AGCCACGTCG
TACAGAGCGG CTGTGGACCC CAGGGAGGAC TTAGCCGCGC TCATGTACAC CGGCGGCACC
ACCGGCGTCC CCAAAGGCGC CGAAATAACC CACGGCAACA TATCGTCCAA TCTACAACAA
CTTAAGCCGC TCTACGAGGT TGTAAAGAGG AGAAGAGGAG AACAACAATT GGTTATGATG
GGCGTACTGC CTTGGTACCA CATATACGGC CAAGTCACAG TCATGCACTA CGGCATATTT
GACGGCGCCA CAGTGGTAGT AGTACCAAGG CCGGACATAG AACAAATTAT GAAGTTGATA
CAAAAGTACA AGGCACATGT GCTCCACGGC GTACCCACCC TATATAATAT GATAATAAAT
CACCCAAAGG CGAGACAGTA CAAACTGTCG AGCCTCGCCT TCTGCATATC TGGGGCCGCG
CCTCTCCCCG TGGAGGTGGC TAAGAAGTTT GAACAGTTAA CAGGCGCAGT GCTGAGGGAG
GGGTACGGCC TTACTGAAAC AGCGGTTGTT ACACACGTCA ATCCTCTATA TGGCAAAGCC
AAGGCGGGGT CCATTGGACT CCCCATACCT TCTACCTACG CCGCTGTGGC AGACCCCGAC
AAGCCCATCC TCCTGCCCCC AGGCCAAGTG GGAGAAATCG TCATATCGGG TCCCCAGGTG
TTCAAGGGGT ATCATAATAG GCCTGAGGAA AACGCCCAAG CCTTCTTTGA ATGTTGCGGC
TTGAGGTGGT TTAGGACAGG CGACATGGGG TACATGGACG AGGAGGGGTA CTTCTACATT
GTGGACAGGA AGAAGGACAT GATTAAGTAC AAGGGCTACT CTGTGTTCAG CAGAGAGATA
GAGGAGGTGC TTTATCAACA CCCATGTGTG AAAGAGGCGG CGGTAATAGG CGTGCCGCAT
CCAGAGGCAG GCGAGATACC AAAGGCGTTT ATAGTCCTAA GAGAGGAGTG CAAGGGCAAG
GTAACGCCTG AGGACATAAT TAAGTGGACA GAGGACAAGC TCGCCCATTA CAAGAGGCCG
CGCGCCGTTG AGTTCAGAGA CGAGTTGCCT AAATCCGCCG TGGGCAAAAT CCTAAAAAGA
GAGCTGAGGG CCGAGGAGCT ACGCAAGCTA CAGGAAAGCG CGGCAAAGGC TTAA
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| Protein sequence | MTKEVFEKYI ATRIWAKNYD EGVPPEVQIK PEPLFSYLDR QAAERGSATA YVYFGNKISF
KTVGDHSDRV AAALKEWGLG KGDVVALYLP NTPAFPIIYY GALKIGAVVS PMNPMYTPRE
VAYQAKDAGA RVIFVADVLY KNVEEADKMH KFDRVVVVEV AEYMPAFIKP LAKRRLKPPK
IPYGGRIVSY KSLLSHKATS YRAAVDPRED LAALMYTGGT TGVPKGAEIT HGNISSNLQQ
LKPLYEVVKR RRGEQQLVMM GVLPWYHIYG QVTVMHYGIF DGATVVVVPR PDIEQIMKLI
QKYKAHVLHG VPTLYNMIIN HPKARQYKLS SLAFCISGAA PLPVEVAKKF EQLTGAVLRE
GYGLTETAVV THVNPLYGKA KAGSIGLPIP STYAAVADPD KPILLPPGQV GEIVISGPQV
FKGYHNRPEE NAQAFFECCG LRWFRTGDMG YMDEEGYFYI VDRKKDMIKY KGYSVFSREI
EEVLYQHPCV KEAAVIGVPH PEAGEIPKAF IVLREECKGK VTPEDIIKWT EDKLAHYKRP
RAVEFRDELP KSAVGKILKR ELRAEELRKL QESAAKA
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