Gene Pcal_0649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0649 
Symbol 
ID4908351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp612710 
End bp613918 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content59% 
IMG OID640124398 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_001055541 
Protein GI126459263 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTGG GTGGGAAAAG ATTAGAAAAC GTGTACCTAG TGGCATTTGC AAGAACGGCT 
TTTACAAGGT TCTCGCGGAA GGAGCCTCAG AAAGACGACT TCTGGGACCT AAGGCCGGAG
GAGATAGCCG CAGTCCCTGT CAGGGCAATC CTCGAGAGGA CTGGCGTAAA GCCCGAGGCG
GTGGAGGACC TGCTTACCGG CACCGCGCTT CCGGTGGGCG AGCAGTGGCT CTACGGCGGC
CGCCACGTCG TCTTTGCCGC AAAACTTCCC TACACAATAC CTGCGGCCCA TATAGATCGA
CAGTGCGCGA GTTCCATAAC CACGGTGGCC ATGGGCGCCA TGGAGGTGGC CTCAGGCATG
GCCGACGTGG TTATCGCCGG CGGAGTAGAG AAGATGTCTA AGACCCCCAT GTATGAGAAT
CCCCACATCG AGATAAACCC CAAGTTTCTC ACCGACGAGG AGTATGTCCA CTTGTACAAC
CTCCACATTG GATACGTCAT GGGCCTGACC GCGGAGAGGC TCGCCGAGGT GTCTGGCATT
AAGCGCGAGG AAATGGATGC CTGGTCTCTA AGGAGCCACA AGAGGGCTGC AGAGGCCTAC
GAAAAGGGGT ACTTCAAGGA GGAGATAGTG CCAGTGGCCG TGGAGAAAGA GGGGCAGAAA
AAGGTGGTTG ACAGAGACCA GGCTGTTAGG CCGGACACCA CTCTAGAGGC CTTGGCCAAG
CTGCCGCCTG CCTTTAAGCC AGACGGCGTA ATAACCGCCG GCAACTCCTC GCCGCTTAAC
TCGGGGGCGG CCTACGTAAT GTTAGCCTCA GGCGAGGCTG TTAAGAAGTA CGGCCTCCAA
CCCTTGGCAA AGGTGAGAGC AGTGGCCTTT GCCGGCGTTC CCCCAGAGGT TATGGGCATG
GGCCCCGTCC CCGCGTCTAG GAAGGCCCTT GAAAAGGCAG GCCTCACGGT GAAGCAGATA
GGCAGGTGGG AGATCAATGA GGCCTTTGCC GTGGTGACTC TCTACGCGAT AAAGGAGCTG
GGCATAGACC CGGAGCTTGT GAACACAAGG GGCGGCGCCA TCGCCATCGG CCACCCGCTG
GGGGCAACTG GCGCAAGGAT AATAGGGACG CTCGCGAGGC AGCTACAGCT CGACGGCGTG
GACTACGGAG TGGCGACCCT CTGCGTAGGC GGAGGCCAAG GCGCCGCCGT TGTGCTAGAA
AGAGTTTAA
 
Protein sequence
MSVGGKRLEN VYLVAFARTA FTRFSRKEPQ KDDFWDLRPE EIAAVPVRAI LERTGVKPEA 
VEDLLTGTAL PVGEQWLYGG RHVVFAAKLP YTIPAAHIDR QCASSITTVA MGAMEVASGM
ADVVIAGGVE KMSKTPMYEN PHIEINPKFL TDEEYVHLYN LHIGYVMGLT AERLAEVSGI
KREEMDAWSL RSHKRAAEAY EKGYFKEEIV PVAVEKEGQK KVVDRDQAVR PDTTLEALAK
LPPAFKPDGV ITAGNSSPLN SGAAYVMLAS GEAVKKYGLQ PLAKVRAVAF AGVPPEVMGM
GPVPASRKAL EKAGLTVKQI GRWEINEAFA VVTLYAIKEL GIDPELVNTR GGAIAIGHPL
GATGARIIGT LARQLQLDGV DYGVATLCVG GGQGAAVVLE RV