Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0605 |
Symbol | |
ID | 4909076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 567941 |
End bp | 569884 |
Gene Length | 1944 bp |
Protein Length | 647 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640124353 |
Product | type III restriction enzyme, res subunit |
Protein accession | YP_001055498 |
Protein GI | 126459220 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1061] DNA or RNA helicases of superfamily II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGCGTT TCTGCGTTGT CATAAACGGC GTTGCAGTGT ATAGAGAGTG GCAGTGGGAC AAAATAGTTA AAGTAAAAGA GGAGCTGAAG CGGCTTGGCT TTAAGTGGGA TGGCTCTTGT TGGTCTACTA AGACTCGGAA CCTCGCTGTG TTGAGTGAGG TGAGGCGGTT GCTGAATTTA ACCGGTGAAG AGTACCTCTC TCTTCTCTCC GCATTCTCAT TTGACGTGTC TGGCGGCGCT GTGGCTATTT CTGGCCCTCT TCCGGAGGAT CTAAGGCGGC ACGTCGTAGC GTCAGACGGC GACGTCCATG TAGTTTCGCT TTCGGGGTTT TTGAGGAGTT TTGTAATGGA GAGCCGGGAG ATTTCCCAAG TGGAGAGTTT TGAGGAGTTT GTGGACTTGG GCGTCAAGAG GCTTCTGGAG TTGCTCAAGG GGGCACAAGT GTGGGGGAAC TTGGACGAGG CTGTTAAAAA CGCGAGGGAA ATTGTTCTTG CGTCTGATAG GCTTAGAGAG GCGTTTAACA GGCGGAGGAG TTGGCGAGTT GCCGTGGTGG GGCCTAACTA CGCTAAGTTG AATTTCTTGG CCTCTGGCCT CTTGAAGAGG CTGGCAGAGC TTAAGCTGAA ATACAACGTG GTTAAGAAAG ACGGCGAGTT AGAAGAAAGA GACTTGAAGC TCGTCAAAGT GGAGAAGGGC GACACGTATT TACTTAAGTT CCCTGTCTTC GTGAGAGATA GGGTTGTAAA AATCCTAAGG GAGTTGGGCT ACGTAGCCCA ACTGGCTGAG GTGGAATACC CAAAGGTGAG CTACAAGAGG GAGTTTTCAC TATTCCCGTT TCAGGCCGAA GCTGTGGAAA ACTGGGTTGC CCACGGCATG AGGGGCACCG TGATTATACC AACTGGAGGG GGCAAGACAT TTGTGGCATT GGAGGCCATG TACAGGGCTG GAGTGTCGGC CCTAGTTCTA GTTGTCACTA GAGAGCTGGC GTTGCAGTGG GTTGAGCGTA TTAGAAAGTT CCTCGGCGTA CAGCCGGGCA TGTTGGGCGG CGGAGAGAGG AACGTAAGAG ATGTCACTGT GGCGATCTAC AACTCGGCTG TAAAGTACGT GGACGAGTTA GTGGGCCGCT TTGGCCTAGT CGTATTCGAT GAGGCGCATC ACGTGCCCGC AGAGACGTTT AAAGAGGTTG CGCTTAACAT AGATTCTCCG TTTAGACTCG CCCTCTCCGC GACACCAGAG AGGGAGGATG AAAACGAGCA CTTGATATTT GAGGCGGTTG GGCCGCCTGT TTATAGGGCG TCGTATCGAT CTATGATTGA GTCTGGGCTA GTGGTTCCAG TAGAACACTA CCGCGTTTAT GTGAAAATGG ACGAAGAAGA GGCGCGCGCC TACGCCTCGT TACCTCCTGA CAATGCAATT TTGTTGCGCA ACGTCGCCGC CAAAAGCAAG GCGAAGATCC CAGTCGTCCT ACAGATTGTG TCTAGGGAAG TTGCACTTGG CTCAAAGGTC TTAGTCTTTA CGCAGTTCAT TGACCAAGCC GAGGAGTTGT ACAAGAGGCT CAGAGAGGCG GGTATACAGG CCGAGTTAAT TACCTCGGAA GAGGGGGGGC GCGAAGTTGC CTTAAGAAGG TTTAGCGCTG GGAAGAGTCG GGTGGTTGTA ACAACCACAG TCCTAGACGA GGGGGTGGAT GTGCCAGACG CAGATGTGGC AGTCGTGGTC AGCGGCACTG GATCTAGGCG TCAGATGATC CAGCGGGTGG GCAGAGTGGT TAGGGCGTCG CCGGGGAAGA AGGTGGCGAG GGTCTACGAA ATAGTCACGC GGGGAACGAT AGAGGAGGCG TTGTCTGAGG CTAGACACTT CGACGACTTT ATAGAGGAGG CAGTGTGTAG GAGAGTTCTT GAGAAGGAGT TGGCCGCGCT GTTAAAGAAG CCGACGCTGT CTAACTGGTT TTAA
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Protein sequence | MPRFCVVING VAVYREWQWD KIVKVKEELK RLGFKWDGSC WSTKTRNLAV LSEVRRLLNL TGEEYLSLLS AFSFDVSGGA VAISGPLPED LRRHVVASDG DVHVVSLSGF LRSFVMESRE ISQVESFEEF VDLGVKRLLE LLKGAQVWGN LDEAVKNARE IVLASDRLRE AFNRRRSWRV AVVGPNYAKL NFLASGLLKR LAELKLKYNV VKKDGELEER DLKLVKVEKG DTYLLKFPVF VRDRVVKILR ELGYVAQLAE VEYPKVSYKR EFSLFPFQAE AVENWVAHGM RGTVIIPTGG GKTFVALEAM YRAGVSALVL VVTRELALQW VERIRKFLGV QPGMLGGGER NVRDVTVAIY NSAVKYVDEL VGRFGLVVFD EAHHVPAETF KEVALNIDSP FRLALSATPE REDENEHLIF EAVGPPVYRA SYRSMIESGL VVPVEHYRVY VKMDEEEARA YASLPPDNAI LLRNVAAKSK AKIPVVLQIV SREVALGSKV LVFTQFIDQA EELYKRLREA GIQAELITSE EGGREVALRR FSAGKSRVVV TTTVLDEGVD VPDADVAVVV SGTGSRRQMI QRVGRVVRAS PGKKVARVYE IVTRGTIEEA LSEARHFDDF IEEAVCRRVL EKELAALLKK PTLSNWF
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