| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0508 |
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| Symbol | |
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| ID | 4908492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 485446 |
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| End bp | 486171 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640124255 |
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| Product | hypothetical protein |
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| Protein accession | YP_001055402 |
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| Protein GI | 126459124 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1637] Predicted nuclease of the RecB family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTACTTGG AGAGGCCGTC TGCGAAGGAG GCGGCTCAAG TCGTTAACTG GGGCAAGAGG
AGGGGCATAG TCGTCGTTGT TGGACTGTGT GAAGTTAATT ATGCGGGAAG GGCCGCTGCG
TCTCTTAAGC GGGGCAAGAG GCTTTTAGTA GTGAAGCGGG ATGGGACTCT GCTGGTACAC
GAGGCTGAGA AGGCTCAGCC CAAGATATGG AACCCCCCTG GCTCTTCCAC CGCCGCGTTT
GAGGAGAACG GCCGGCTTGT GGTAAAAAGC GTAAGACAGC GCCCGTTTGA GACTGTAAAA
GTGGTCTTTG AAGAGGTGGA CTTCGTTGGT GTCTTCGACG TTGGGGCCAG CGAGCTTGAG
CTTATCGGCA GTGAGAAAGA CGTGGTGGAG GCCCTTGTGA GGGCGCCCTG GCTCATAGAA
GAGGGACTAG AAATTGTCGG CGTAGAGGTG CCCACAGAGG TTGGCCACAT AGACATATTG
GCCCGCGACA GGGAGGGGCG CTACGTGGTT ATAGAAGTTA AGAGGGACTT GGCGACTCAC
GATGCAGTGT TTCAACTGGC CAGGTATGTA GAGGTTTATA AGGCCCGGGG GCACGACGTG
AGGGGGGTTT TAGTGGCTGG GGACATTTCT TCTACAGCAT ATGAATATTT AAAGAGGTAT
AATTTGAAAT TTGTAAAGAT TAATCCAAGA GAATTGACGG CATCAAAAGA TAAAAATAGG
CTGTAG
|
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| Protein sequence | MYLERPSAKE AAQVVNWGKR RGIVVVVGLC EVNYAGRAAA SLKRGKRLLV VKRDGTLLVH
EAEKAQPKIW NPPGSSTAAF EENGRLVVKS VRQRPFETVK VVFEEVDFVG VFDVGASELE
LIGSEKDVVE ALVRAPWLIE EGLEIVGVEV PTEVGHIDIL ARDREGRYVV IEVKRDLATH
DAVFQLARYV EVYKARGHDV RGVLVAGDIS STAYEYLKRY NLKFVKINPR ELTASKDKNR
L
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