| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0443 |
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| Symbol | rpl7ae |
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| ID | 4908891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 425432 |
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| End bp | 425881 |
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| Gene Length | 450 bp |
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| Protein Length | 149 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640124194 |
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| Product | 50S ribosomal protein L7Ae |
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| Protein accession | YP_001055342 |
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| Protein GI | 126459064 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1358] Ribosomal protein HS6-type (S12/L30/L7a) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGGTGA CGATTGACCC AAAGACGTTC TACGCCAACC CTCTGCCGGG GAAGCCGTTC
TACGTCAGAT TCGAGGTGCC GAGCGACGTG GCTGAGAAGG CGCTGGAGAT ACTTTCAATT
GCGAGGCAGA CGGGGAAGAT CAAAAAGGGG ACTAACGAGA CTACTAAAGC CGTGGAGCGC
GGCCTTGCGA AACTTGTGTT AATTGCCGAG GACGTGGACC CCCCCGAGGT TGTTGCCCAC
CTCCCGCTTC TCTGCGAGGA GAAGAAGGTG CCCTACGTCT ATGTGCCGTC TAAGGAGAAG
TTGGGAAAGG CGGCTGGGAT AAACGTGGCC GCCGCGGCCG CGGTGGTAAT TGAGGCAGGC
CAAGCTGCAG GAGAGCTGGA GGCGCTGGTA AACAAGATCA ACGAGATTAG GGCAAAACAC
GGGCTAAACG CCATCCCGGT CAGACGCTAA
|
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| Protein sequence | MAVTIDPKTF YANPLPGKPF YVRFEVPSDV AEKALEILSI ARQTGKIKKG TNETTKAVER
GLAKLVLIAE DVDPPEVVAH LPLLCEEKKV PYVYVPSKEK LGKAAGINVA AAAAVVIEAG
QAAGELEALV NKINEIRAKH GLNAIPVRR
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