| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0404 |
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| Symbol | |
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| ID | 4910055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 386436 |
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| End bp | 387650 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640124156 |
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| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
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| Protein accession | YP_001055304 |
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| Protein GI | 126459026 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.542778 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGCAA TAGAGGGAGG AGCGCCCGTC CGCAGAGAAC CCATTGTGGC AAAACCCGTG
GTTTACAGCG AGGAGCTGGT GCAGGCAATC GCCGAGATTC TCAAGTCGGG CGTCCTCACA
GCACAGCACG GCAAGTGGGT AAAGGCCTTT GAGGCAGAGC TAGCCGCCTA CTTGGGAGTG
AGACACGTGG CCGCCGTCTC CAACGGCACC ACTGCGCTAC ACGTCGCCCT CAAGGCAATC
GGCGTGGGGC CAGGGGACGA GGTTATAACG ACCCCCTTCA CCTTCGCCGC GTCGGCCACC
GCCATATTAC ACGCAAACGC CGTCCCCATA TTCGCCGACA TAGACAGAGA AACCCTCAAC
CTAGACCCCG CCTCAGTGGA GGAGAAGATA ACCGAGAGGA CAAAGGCCAT AGTGGTGGTA
CACCTCGCCG GCATGCCCGC GGAGATGGAC CAGCTCATGA AAATCGCCGA GAGGTACGGG
GTAAAAGTAG TAGAAGACAC GGCGCAGGCC CTCGGCGCAG AGTACCGCGG CCGCAAGGTG
GGGGCCATAG GCCACATCTC CACCTTCAGC CTATACGCCA CCAAGCACAT AACCTCAGGC
GAGGGAGGCG CCGTCGCAAC CGACGTGACA GCCTACGCGG AGAGGGCCAA GCTGATAAGG
GCCCACGGAG AGGTGGGAAA GTACAGCTAC GAAATACTCG GCTACAACTA CCGCATGACA
GAGATCCAAG GCGCCATAGC CTACCACCAG CTCAAACAAC TGCCAGAAAT GCAGAAGAGG
CGCGAGGCCT ACGTCAAGGC CCTACTCGAC GAGCTGGCGC CGCTGGAGGG CGACCTGCTG
ACAATACCCA AGCCCAAGCC GTACATGAAG CACGCCTGGC ACCTAGTCCA AATACTCCTC
GCCATGGAAA AGCTCCGCAA GCCAAGGGAC TGGGTCGTAG AGGCCATAAG GGCAGAGGGC
GTGGGAAACA TCTACGTCGC CTACCCAACC CCCCTCTACA AAACCCCCCT CTTCCAACGC
CGCGAGGGAC ACGGCCTGGG ATGCCCCTGG ACCTGCCCCT ACTACAAAGG CAAGGCCCAG
TACGAGCCGC TGCCAAACGC CGAGTGGGCC GCCGAGAGAG TAGCCACACT CCTCGTAATG
CCAAACCTCA CAGAACAAGA CGCCGCAGAC ACCGCCACCG CCATCAAAAA AGTCCTCAAC
GCCGTGCGGA GATAG
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| Protein sequence | MLAIEGGAPV RREPIVAKPV VYSEELVQAI AEILKSGVLT AQHGKWVKAF EAELAAYLGV
RHVAAVSNGT TALHVALKAI GVGPGDEVIT TPFTFAASAT AILHANAVPI FADIDRETLN
LDPASVEEKI TERTKAIVVV HLAGMPAEMD QLMKIAERYG VKVVEDTAQA LGAEYRGRKV
GAIGHISTFS LYATKHITSG EGGAVATDVT AYAERAKLIR AHGEVGKYSY EILGYNYRMT
EIQGAIAYHQ LKQLPEMQKR REAYVKALLD ELAPLEGDLL TIPKPKPYMK HAWHLVQILL
AMEKLRKPRD WVVEAIRAEG VGNIYVAYPT PLYKTPLFQR REGHGLGCPW TCPYYKGKAQ
YEPLPNAEWA AERVATLLVM PNLTEQDAAD TATAIKKVLN AVRR
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