Gene Pcal_0302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0302 
Symbol 
ID4909585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp294159 
End bp294668 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content63% 
IMG OID640124053 
Productabortive infection protein 
Protein accessionYP_001055204 
Protein GI126458926 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCCTTA AAGAGGTTGA GGCCAGAGAC GCCGCGGCGC TGGCCCTCCT CCTCGCGGTA 
ATGCTGGCTC TCCCAAGCCC CCTCGGCTAC TTAGCCGTAT TTGCCGCCGT AGTGCCATAT
TACAAGAAAA TTACGTGGGC CACCTTCTCT CCAAGCCCTC TAGCCGCGGC CCTCCTGCTG
TACACAACTA CGTTTCTCGT CGACTATGCC ACAGTGGGCA TACCGACGCA GCGCCCCCCC
TGGCTCACCG CCGTGGTCTT TGCGCCACTC GCCGAGGAGC TCGTCTTCAG AGCGCTCGCC
TTCGCCCTAC TGCCGACGCC CCTCTCCTGG GTCTTCTCAG TGGTCATCTT CGGCGTACTC
CACCTGGACA ACCCGCTGTT AGCCGCCCTA TACGGAGCTG CCCTCTCCCT CGCGTACAGA
GGCGGGGGGT ACTTCGCCTC CTCCGCCCTA CACGCCTTTA ACAACGCCCT CTGGCTCTAC
CTAGCGCAAT GCCTCCACGG ATGCGCCTAG
 
Protein sequence
MGLKEVEARD AAALALLLAV MLALPSPLGY LAVFAAVVPY YKKITWATFS PSPLAAALLL 
YTTTFLVDYA TVGIPTQRPP WLTAVVFAPL AEELVFRALA FALLPTPLSW VFSVVIFGVL
HLDNPLLAAL YGAALSLAYR GGGYFASSAL HAFNNALWLY LAQCLHGCA