| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0299 |
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| Symbol | |
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| ID | 4908754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 291252 |
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| End bp | 292622 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640124050 |
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| Product | DNA repair helicase RAD25 |
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| Protein accession | YP_001055201 |
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| Protein GI | 126458923 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGATTGA CGACGCCGAG AATCGTCCTT ACCTGGGACA GGGGCACAGT CCTAGTGGAG
GGCTCTCTCC CCCAAGAACT GCGCAAGCTC TCCTTTCTCA AATTCGACGA GAGGGTAGGG
AAGTACCGGG CCCTCGCAAT CTACTACCCG CGGATTTTGG CGGCGGCTAG GGCCTTGGGG
GTTGAGGTGG AGGACCGGGT GTGGTCTCTC CACTGCGCCG AGGTGAGAGC CGCGGCTGAG
GCTAAGCTGA GAAGCTACCA GGCCGAGGCG CTGGCGGCTT GGTCAAAGGC TAAGAGGGGC
GTGGTGGTCA TGCCCACGGG GGCTGGGAAG ACTTACGTGG CAATTGCCGC CATAGCGCAG
ATGAGGGTAC CCGCCCTAGT GGTGGTGCCC ACTGTCGAGC TCCTCCAGCA GTGGAGGAGT
AGGCTCTCCC AGTACTTTCC AGGGAGAGTG GGGGTTTGGT ACGGCGAGGA GAAGCGGGAG
AGCTGTGTCA CAGTCATCAC CTACGACTCC GCCTACGCCG CGGTGGAGGT GCTGGGCAAT
AGGTACATGT TTCTCGTCTT CGACGAAGTC CACCACTTGC CCTCCCCCTC CTACCGGCAG
ATAGCGGAGC TTAGCCCTGC CCCGTATAGG CTGGGTCTCA CGGCCACTCC CGAGAGGGCG
GATGAGCTAC ACGTGGACTT GGACTGGCTC GTGGGGCCTG TGGTGTACAA AATGTCGGCG
AGGGACATCA GGGGTGTGTG GGTAGCAGAC TACGAGGTGG AGGTGGTCAA GGTGGAGTTG
ACCGAGGAGG AGAAGATGGT GTACAAAGAG GCGGAGCAGA GGTACCTATC GTATCTGAGG
AAGAAGGGGC TGAGGTTCAA GTCGCCCTCT GACTTCCAGA AGTTGGTGGC GCTGGCTGGG
AGAAGCCCCG AGGCCAGGAG GGCGCTTGAG GCTTGGCACA TCATGAGGAG GCTTATCCAC
GAGACCTCTG CCAAGGTGGA GGCGGTGGGG GAAATACTCG CGAGGCACCC CGCCTCAAAG
GTCCTCATCT TCACTGAATA CACCTCGCTT GCCAGAGCCG TCTCCGAGCG CTACCTCATA
CCCCTGGTCA CACACGACAT AAGTCCCCAG GAGCGGGAGC AGGTAATGGC CATGTTCCGC
AGGGGGGAGG TCAAGGCGAT TGTGACTGGG AAAGTCTTAG ACGAGGGGGT GGACGTGCCA
GACGTGGACG TGGTGGTGAT TTTGGGCGGG ACGTCCAGCG TTAGGCAGTT CATACAGCGG
ATGGGCCGCG CGCTTAGGCT CAAGCCGCAT AGGGCCAAGA TCTACGAGGT GGTGACGGCG
AAGACGAGGG AGGTGGACAT GGCCAGGAGG AGGAAGAGGG GCGTGTCATG A
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| Protein sequence | MGLTTPRIVL TWDRGTVLVE GSLPQELRKL SFLKFDERVG KYRALAIYYP RILAAARALG
VEVEDRVWSL HCAEVRAAAE AKLRSYQAEA LAAWSKAKRG VVVMPTGAGK TYVAIAAIAQ
MRVPALVVVP TVELLQQWRS RLSQYFPGRV GVWYGEEKRE SCVTVITYDS AYAAVEVLGN
RYMFLVFDEV HHLPSPSYRQ IAELSPAPYR LGLTATPERA DELHVDLDWL VGPVVYKMSA
RDIRGVWVAD YEVEVVKVEL TEEEKMVYKE AEQRYLSYLR KKGLRFKSPS DFQKLVALAG
RSPEARRALE AWHIMRRLIH ETSAKVEAVG EILARHPASK VLIFTEYTSL ARAVSERYLI
PLVTHDISPQ EREQVMAMFR RGEVKAIVTG KVLDEGVDVP DVDVVVILGG TSSVRQFIQR
MGRALRLKPH RAKIYEVVTA KTREVDMARR RKRGVS
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