Gene Pcal_0298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0298 
Symbol 
ID4909255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp290101 
End bp291255 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content61% 
IMG OID640124049 
Producthypothetical protein 
Protein accessionYP_001055200 
Protein GI126458922 
COG category[S] Function unknown 
COG ID[COG3372] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTGA TGTCCATAGA CTACCTCCGC GTCGTGCGGA AGGGCGGAGA GATTAGGCCG 
AGGTATCTCT CCGACGCGTC GGCGGCGGCT GAAGTCATTG AGGCGGCGAG AGGTGCCAAG
ACGCTGGGCG AGTTCAAGAG GAGGGTGGAG GCGCTTGGCT TTGACAAAAA GCTGGCGGGC
GGCCTCGCCC ACGTCCTCAG CCACTTCCTC AAGGCTGAGT CAGTGGACAG GCGCCTGGTC
TCCAGGATCA GGCTTGAGGT CTTTAAAGCC GCGGCGGCAT CCTGGCCCGT CTTAACAGCT
GAGGCGAGGG AGGCTGTCTT CAACACGGTG GCGTCCAAGC TCAGGCTAGA CCCCGGGGAG
GTGAGGTGCC TCTTCTTAAA GGCCTACGAG GACAACTTAG AGATCGTCGA GCCCCCCTCC
ATTACGGCGG AGGAGCTGGC GCGGGAGTAC AACCTCGCGC TTATGCAGAC GCTCTTGTTC
AAGTCGTTAT ACGTAAAGGC GTGGGTCCCC AACGCCCCCG CGGTGGTGAA GAGGCTGATA
AGGGCGGTGA AGGGGTACCG CCTAATGTAC ATAGCCGAGG AGGGGGACGG GGGGTGGCTC
GTGTTCCACT TCGACGGCCC AGTCTCCGCG CTTAGGCAGA CCGAGCGGTA CGGCACTAGG
CTCGCCAAGC TCGTGCCCTA CATAGTCTCC GCCGGACAGT GGAAAATAGA GGCACAGATA
AAGCTGAGGG ACAGAGTGTA CACATACCGC GAGGACTGGC GCACGGCCCC CGACCTGCCG
CGCCAGCCTC CGCCGGAGGA GGAGTTCGAC AGCTCTATAG AGGCGGAGTT CTACAGGCAA
GTGTCTAGGG TCTGCCGCGT GGAGCGAGAG CCCGAGGTCC TCGTAGTGGA CAAGAGAGTG
TACATACCGG ACTTCAAGAT AGGCGATTTG TACGTCGAGG TGGTGGGCTT CTGGACGCCG
GACTACCTCA GGCGGAAGTA TGAAAAGCTG GCTAAGGTGA AGAAGCCCCT CCTAGTCCTT
GTGAGCGAGG AGCTCGCCAT GGCCACGTGG AAGGAACTGC TCCCAAACGT GGTGTTGTTC
AAGGACAGGC CTAGGCTCAG CGACGTGTAC AAACACATAA AGCCCTACTG CACGCCGCCG
GGGAGACAGC CCTAG
 
Protein sequence
MTLMSIDYLR VVRKGGEIRP RYLSDASAAA EVIEAARGAK TLGEFKRRVE ALGFDKKLAG 
GLAHVLSHFL KAESVDRRLV SRIRLEVFKA AAASWPVLTA EAREAVFNTV ASKLRLDPGE
VRCLFLKAYE DNLEIVEPPS ITAEELAREY NLALMQTLLF KSLYVKAWVP NAPAVVKRLI
RAVKGYRLMY IAEEGDGGWL VFHFDGPVSA LRQTERYGTR LAKLVPYIVS AGQWKIEAQI
KLRDRVYTYR EDWRTAPDLP RQPPPEEEFD SSIEAEFYRQ VSRVCRVERE PEVLVVDKRV
YIPDFKIGDL YVEVVGFWTP DYLRRKYEKL AKVKKPLLVL VSEELAMATW KELLPNVVLF
KDRPRLSDVY KHIKPYCTPP GRQP