Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0194 |
Symbol | |
ID | 4909007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 192399 |
End bp | 195086 |
Gene Length | 2688 bp |
Protein Length | 895 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640123946 |
Product | hypothetical protein |
Protein accession | YP_001055097 |
Protein GI | 126458819 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCTCG GTACTACCAT GTGGCGGACA AAACTGCTAC TGGTCCTGGC TTTCTTACTA CTCCTGTCGG CGGTAGCCTC GGCGCAGATA AAGTGGGCTA AACATATCAA TCCTACAAGC GGAATAGACA AGGGCTATGG CACTTGCCTG TTTGGAAACT ACCTAGTAAT AGTGGGTAGG GCTGGTGACT CGCCCTTCCT TGCGCTGTTG GACAGAGAGA GCGGGGAAGT GGTAAAAATG TGGAGTAGAG GAAGCGGGTG GTTTATCAAC TGCATAGCCG TAGGCGACAG TCTGTACGCG GCTGGATATG TGGAGGAGCG AGATGAGTAT TACCAAATCT ACGTATTTGA CAGAAACCTA AACGTGATAA ACAGAGTTCA AGTGAACAAT GCCGGCCTTA GAGACATCAT ATACTGGGAC GGGTACTTCT ACATCGGGGG GTATGTGTGG AAAGACTTCG GTGGCCAGTA TAAGCCCGTG TGGTATATAG AGAAGAGGGC CCCCGACCTA AGCCTTGTGG CCTACAGGGA GATATACGAC GCCAACTGGG AGGACAGCGA TGTATACAAC GTTGGCGTAA ACCCAGTCAC GGGGGATGTG TGGGCTGTTG GCTATTACAC AGTCGGCGGA GTAGAGCGCC CCCTCGTAGC TATACTAGAC AAAAACCTAA ACCTCAAAAG GCTCATACAA CTCCCAGGCT ACACCGGATT TTTCGGCGGT ATATGCTTTG ACAGAGAGGG AAACGCCTAC GTTAGCGGCA ACAGGACCAC TGTTAAGTAT GACAAAAGCG GCAACTATAT AAAAAGATAC AGCGGTGGTG GTCTTATTAC ATGTATTAAA GATAGGCTAT ACTCATTTGC GCATGTAAAT GCTACAGTGA TAGTTCCTAT GCATCAACTT GTGTACTCAG TAATAGATAT GGAGACAATG GAGAGAATTA AACAAGTAGA TCTTCCTGCC TCTAGTATTG GCATATTTAA CTTAACTACT GTTTACGCCC CCGGCAGACC GTCTTTTGAC GGGCGGTATG TCTACGCGGC TGGCGTCTTG GATCTCGGCT TTAGGACAGA AGGTGGGATG ATCACTAGGG ATACCGAGAT CGTGGTTTTT GCCGTGCCGG TCGTGTCAAC GGTCAAGGTG GTGGACTCTT CTGGCCGCCC GCTTGCTGGC TTTGTTGTAA GAGGCGTTAC CGACAGCTAT TCCCTTGTCA ACTCCACTGG GGCCGACGGC GTTGCGTCGT TTTGGGGTCT GGCGCCTGAC GTCGTCTACG TCTTTGACAG AAGTGGGCGG TTGGTGTGGG TTGGCAATGT CACCTCGCTT GTTGCCACCG TCACGGTGCG TTTGGCCAAC TCCCTTCCTG CCACAAGCCC GGCCGACTTG AGAGGCTACT TAGTGTTGAA GAGAGTGCTC TTCATAGACG GCTCAACTAG AGACGTGAAA TACAACTTCC AGCTTGCCAA CGGCGTTTTA ACCGTGGAGG GGGACGTGCC GCTGGATGTG CCGTACCCAG TGGAGGTTTA TGTGACAGAG TTCTCCATTG GCTCCGCCAC TCTCGTACTG CGTGGTGGAG CCTACCTCGC CTATTCTGGC ACGGCGAGGG ACTTAGCCAA CGGCCTTGAC TTCGGCAACT TGTTCACTAG GCTGGAGGTC TCTGCGGTGG ACTCCACGGG CGCCGCGAGG AGTGACTGGG CTGTCCAGTT GATCTACCAA GGCGCCAAAT TAGCCGAGGG GAGGGGCGCG CTCACCGTCG TTGTGCCGCG TACCTCTGTG CTTGGCCAGC CCTACGTGGC CAAGGTCGTC ACCACGGCCC TCGCGCCGGA TGGGTTGGCC GCTACAAGGG AACAGTTAGT AGCAGCGGAG GGGGACAGAA GGGAGGTGCG GCTGGTGGTG AACACTACCA GGGTAACCGT GTTGGCCGTG GATGGGTTTG GGCAGAGGAG GGATTGGCCG GTGGAGATCG AGAACGTGGC GAGGGGTGTG GGCTATGTGT CTGCTGAGCT GTTGGATGGT GCCGTGTATA CGGCCAAGGC GTCGGGCCTT GGCTTCACTA ACGTGACTAA GTTTGTGGCT AGGGGCCCGG AGATGTCCGT GGCTGTGAAA ATACCCACGG CCCGTCTCAC GGCGCGGGTA GTGGACGGCT TTGGCAATGT GAGGAGCGAC TGGCCTGTGG AGGTGGTGGG CGTGGGCTCT GGGCAGGGTT CCGTCGCGGC TGAGGTGCTT GCTGGGCGGT ACATGGTGAG GGCCACGGCG TTTGGGAGAG AGTTTGCGAG GGAGGTGGAG GTGGCGCCTG GCCAAAATGT CGTTGCAGCG GTGCAAGTGC CCACGGCGCG GTTGAAGATA TACGTCGTAG ACGACGATAG GAAGCCTATT GACCAGTACG TCACTTCGGT GGAGGTGAGC GGTCCAGTGG CTCAGAGCTT TTCCAGGCCT CCCGGCGACA TAGAGGTATT GGCAGGACAG TACACTGTCA CTGTCACAGC CTTGGGCAAG CTGGCGTCAT CGCAGGCAGT GCTACAGCCC GGCCAATACG CCACAGTTGA AGTGCTTGTG CCAGGCACCG CTGGGATAGA CATAGGGGGA ACCCGCATCA CGTATTCAAC GCTTTATACA ATACTGGGAG TAGCCGTAGC TGTGGCTGTG ATTGGCTTTG TCGTAGTGAG GTTGAGATCT AGGGGGAAGG GGCATTGA
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Protein sequence | MLLGTTMWRT KLLLVLAFLL LLSAVASAQI KWAKHINPTS GIDKGYGTCL FGNYLVIVGR AGDSPFLALL DRESGEVVKM WSRGSGWFIN CIAVGDSLYA AGYVEERDEY YQIYVFDRNL NVINRVQVNN AGLRDIIYWD GYFYIGGYVW KDFGGQYKPV WYIEKRAPDL SLVAYREIYD ANWEDSDVYN VGVNPVTGDV WAVGYYTVGG VERPLVAILD KNLNLKRLIQ LPGYTGFFGG ICFDREGNAY VSGNRTTVKY DKSGNYIKRY SGGGLITCIK DRLYSFAHVN ATVIVPMHQL VYSVIDMETM ERIKQVDLPA SSIGIFNLTT VYAPGRPSFD GRYVYAAGVL DLGFRTEGGM ITRDTEIVVF AVPVVSTVKV VDSSGRPLAG FVVRGVTDSY SLVNSTGADG VASFWGLAPD VVYVFDRSGR LVWVGNVTSL VATVTVRLAN SLPATSPADL RGYLVLKRVL FIDGSTRDVK YNFQLANGVL TVEGDVPLDV PYPVEVYVTE FSIGSATLVL RGGAYLAYSG TARDLANGLD FGNLFTRLEV SAVDSTGAAR SDWAVQLIYQ GAKLAEGRGA LTVVVPRTSV LGQPYVAKVV TTALAPDGLA ATREQLVAAE GDRREVRLVV NTTRVTVLAV DGFGQRRDWP VEIENVARGV GYVSAELLDG AVYTAKASGL GFTNVTKFVA RGPEMSVAVK IPTARLTARV VDGFGNVRSD WPVEVVGVGS GQGSVAAEVL AGRYMVRATA FGREFAREVE VAPGQNVVAA VQVPTARLKI YVVDDDRKPI DQYVTSVEVS GPVAQSFSRP PGDIEVLAGQ YTVTVTALGK LASSQAVLQP GQYATVEVLV PGTAGIDIGG TRITYSTLYT ILGVAVAVAV IGFVVVRLRS RGKGH
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