| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0108 |
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| Symbol | |
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| ID | 4909936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 106259 |
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| End bp | 108172 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640123859 |
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| Product | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein |
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| Protein accession | YP_001055012 |
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| Protein GI | 126458734 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0476147 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAAGT TAATGAAAAT AAGATTTTTA ATAGGCGGGC CGCAAGGCAG AGGAGTTGAA
ACCGCGTCTT TTATGTTTAT ATACGGCGTG GGCGCCGCTG GATACTACAT ATACGCGCGG
CGCGAGTTCT GGAGCAACAT AGCTGGGGGA CGCCACAGCT ATGTGGTAGG CACAATCTCC
GAGAGTTGGC CAGCCCCCGC GCCCGGCAAC ACAGTGGACA TGGCCCTCAC CTTCGACGGC
CACGCCGTCT TGGAACACGT GTTCCACCTG AGGCGGGGGA GCTACCTCGT GTATAACACC
GAAGAGGAGA CCAAGACGCC GGACAGCTAC AACATGATGT CTAAGGCCCT TGCCGAACGG
CTTAAGAAAT TTGCAAAAGA GAGGGGCTTC GAGCCCACCG TAGGCAACTT TGTAAAATAC
TTGAGGGAAA ACGGCGTAGA AGCCGTGGGA GTGCCCTACA ACAAGTCAAT TACCGAAATC
GGGAGAAAGA TAGGCGTCAC TTCGCCCGTC ATGTTGGCAC GCTTCGTCAA CACCTTCGTC
GTGGCCCTCG GCATGAGCCT CCTGGGGCTG GGGGAGGAGT ATGTGGCCAG AGGCGTGGAG
TTCGCCCTAG GCAAAAAGGC CGAGGTAATT GAACAGAACA GGAGAGTCGC CGTAGAGGCC
ATGAGACTTG TGGACAAGAG AATTGCGACA CTCCAGCCCA GGAGAGTCGA AGTGAAGAGG
GTATTTTGGA ACGGCAACGA GGCCGCTGCC TACGGCAAAA TTGCGGGAGG CGTCAGATTT
GTCTCATACT ACCCCATTAC CCCAGCCACC GACGACGCAA TGACCTTTGA GCGACTTATC
CCATTCCCAG TGAGAAAAGA CGCAGGCGAG CTAGCCGCCT TGGAAAGAGT GGGCGCCGTT
GCCTTCCAAG CAGAAGACGA GCTGAGCGCA ATCGCGGTGA CAACGGGGGC CGCCATCGCC
GGCGCTAGGG CGGCCACGGC CACCTCCGGC CCCGGCTTCA GCCTCATGGC CGAGGCCCTC
TCCATGGCAG GCATGATGGA AGTAGGCGTG GTGGTGACGC TCTGGATGCG GGCAGGGCCT
AGCACAGGCC AGGCGACGAG GCAAGCCCAG GAGGAGTTGC TACCGGCGAC TTTTATAGGC
CACGGCGAGT ATCCCAAGAT TGTCTACGCC AGCGGGGACT TGGAGGAGGT CTTCTACGAC
AGCGTCAAGG TCTTTAACTG GGCCGAGAAG TACAGAGTGC CAGTGATACA CCTAGTAGAC
AAAAACCTCT CAAACACCTT CACTGTGATG CCTCTTCCCG ACTTCTCCAA AGTGCGCATA
GACGCCGTTA AGCCTGTCGT ATTTCCTCAA ACAAAGGAGG CAGAGGCCTA TCCCCTGGAC
TCGCTTGTGC CCCCCAGGCT TCTCCCCGGC GTCTCAAACG CGGTGTTCCA CTTAAACAGC
CTCGAACACG ACCCCGAAGG AGACCCAGAG GAGGACCCCG TGATTGTTGC CAGAATGTTT
GAGAGAAGGA TGGCAAAGAT GAAGTTGATA GATGAGGAGA TACCCCCAGA GGATAAGCTG
GCCTACTTTG GGCCCCCCGA CGCAGAGGTA GTAATCGTGG GGTGGGGGTC CGTCAAGCCC
GCGGTGCTCT CCGCATTGGA GGAGCTGAGA GACGCCGCCT TCCTCTACGT GAAGATGCTT
TACCCCTTCC CAGCCCCCCT GGTCAAGAAG CACCTGGAGG GGAAGAAGAC CCTCTTCATT
GAGAACAACT ACCTCGCCCA GCTTGCTTTG GCGAGCCGCA TGTTTGCAGG CATAGAGCCC
ACAGCAGTTG CTGTTAAGTT CAACGGGAGG CCCGTAACGA CAGACGACGT AGTGGATGCC
TACAAGAGGT TTAAGGCTGG GGAAAAGATT ATTAAAATAG AAACGGACTT GTGA
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| Protein sequence | MLKLMKIRFL IGGPQGRGVE TASFMFIYGV GAAGYYIYAR REFWSNIAGG RHSYVVGTIS
ESWPAPAPGN TVDMALTFDG HAVLEHVFHL RRGSYLVYNT EEETKTPDSY NMMSKALAER
LKKFAKERGF EPTVGNFVKY LRENGVEAVG VPYNKSITEI GRKIGVTSPV MLARFVNTFV
VALGMSLLGL GEEYVARGVE FALGKKAEVI EQNRRVAVEA MRLVDKRIAT LQPRRVEVKR
VFWNGNEAAA YGKIAGGVRF VSYYPITPAT DDAMTFERLI PFPVRKDAGE LAALERVGAV
AFQAEDELSA IAVTTGAAIA GARAATATSG PGFSLMAEAL SMAGMMEVGV VVTLWMRAGP
STGQATRQAQ EELLPATFIG HGEYPKIVYA SGDLEEVFYD SVKVFNWAEK YRVPVIHLVD
KNLSNTFTVM PLPDFSKVRI DAVKPVVFPQ TKEAEAYPLD SLVPPRLLPG VSNAVFHLNS
LEHDPEGDPE EDPVIVARMF ERRMAKMKLI DEEIPPEDKL AYFGPPDAEV VIVGWGSVKP
AVLSALEELR DAAFLYVKML YPFPAPLVKK HLEGKKTLFI ENNYLAQLAL ASRMFAGIEP
TAVAVKFNGR PVTTDDVVDA YKRFKAGEKI IKIETDL
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