| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0090 |
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| Symbol | |
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| ID | 4908720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 90197 |
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| End bp | 92779 |
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| Gene Length | 2583 bp |
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| Protein Length | 860 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640123843 |
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| Product | hypothetical protein |
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| Protein accession | YP_001054996 |
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| Protein GI | 126458718 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000863747 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGACTTC TTCTTGTGGT TCTGGTCTTG GCGGCTGTGG GCCTTGCCTA CGTCTTGCCC
ACGGAGGCGC TGGACACCTT CTACTGGGCG TCCCCCGGCG CGGTCAGAGT TCTCGGCGCA
GATGGGGCTT CGCTGTTTTC TCTAGACGCG GTTTTCCCGC TCGTGGCCAC CGACGCGGTG
GGCAAGTGCT TCGCTGTGGC GAATAGGCCG TACGTCTACT ACACGCAGAC GCAGGGGGTT
GCCGTCACGA TATCGATACC CACAACAGCC ACGCTATCAG ACGACTTGAT AAATGCGTTG
AGGCAGTACG GCGTCTCGCT TACGTCGAAG ACTGTTCCTA TTATACTCAA CCTCACGCTT
CCGTTGCCCC CGGTGGCCTT GGCGGGGGTG TACAAGTCGA CTCTTGTCTC TCTGCACACG
CCCTATGGCT ACCCTCTGTG GGCCACCTCC CTCGGGCCGC AGGTAAACGC CACCGCAGTG
GCCACAAACT GTGTGGACGT GGCTGTGGGC ACTATGGGGG GTGAGGTGTA CGTGCTGAGG
AATGGGAAAG TTGTCTCTAA GGCCTCTCTC CCGTCGCCGG TGACTGCGCT GGCCTATTCG
CGGGACGGCG GCGCGCTGTA TGCGGGCACC ATGGGGGGCG AGGTGTACAA AGTGGAGGGC
TCCTCCGTGT CCAAGGTCTT CTCTTGTCCG GGCTCTGTGC TTGGTCTGGC TGTGCTTTTG
GACGGCTCGC CTGTGGCGGC GTGTTTTTCC AAGGTCGATG TGCCGAAGGT GTACGTGGCG
CCGTATGGGC TAGAGTTTGC TCCCGCCGTC GCAGTGGAGT ACGGCATTGA CACGCCTCGG
GTGCCCTTTG CCGTTAGTCA GAATGGGGAG TGGGTCTTCG TGGGGACCTT CGGCGAGCTT
GTGGCCATTA GGAGGGGGTC CGTCGCGTGG AGGGCTCCCC TCCCCGCTCC CCCGCTCTCC
GTCTACTCCT CGGGGGACGG GTCTATAGTC GCCGTGGGAA CTCTCGGGGG ACACGTAGTG
GTGTTTAAAG AGGGGAGGGA GGTGGCGCGG ATCTCCGCGG GCAGGCCGGT CACTTCTCTT
GCCGCGTCGT TTAACGGGAG GGCCCTCGCC TACGAGACTT GGGACTCCGT CACGCCGGTT
AGACTTGCCA GCGTTAGAAT TGTCCCCGAC GCGCCACAGC AATGCCTCCC GGTGGACGTT
GTGGTGAGGG CAGGCGAGGC CGTCTACGCC TACTCGGTGT CTGGGGCGCA GGACGTGTTG
GTGCCAGTAA GCAAGATATC GGTGGAGCCC CAGTTTAAGT ACCTTGGAGA CGTGAGGTGT
AGGCCTCTGA GGAACGTCAC GCTCGAGGTC ACTGGCGACT TGGCGGAGCA TGTGCCAGTG
CGGTACGCCT TGGAGTACCG CATCTCTGTG GAGCCCGCGG GCCTTGTCAG AGGGCCGGCC
TGGGCTAGCG GCCCTGCGGC GTTTTACGCC GAGCCTAGGG TGGAGATCCC CGTCTACAAC
TCGCCTGTGT CGACCGGCGT CTTGCGGCTG GTGGGCTGGG TGGTGGATGG GAGGAGGCTG
GACGTGCCGA CGCCCTCTCT GACGGTGAAC GTGGATAAGC CGGTGTCCGT TAAGGCAGTT
TACAGGGTGG AGCTACCGCC GTACGTCCAG ATAAACGCCA CTGCTAGGCT TAGGCTCGAC
CTAGTGGTGG TCTTCGACGG CTCTGGGAAC GTGGTGGCCT CCGGCCCCGC GCCCGAGGTC
TCCGCCTACC CGGTCTCCGC GCAGGGGGTG TACGTGCCGC AGGCCCTGGT CTCCACCTCC
TGGCCTGCCT CTGTCAACGG CTCTACGCAG CTGTGGGCCG ACGTGGGGTC TACCGTGGTG
TTTAAGGCGC CTGAGTTCTA CGACTTTAGG AATGGGACTA GGCTGGCCTT TGTGGGGTGG
GCTGGGCTGG AGTTTACGCC TGAGGAGCGG GCGCTTGAGG TTGTGCGGAC TGTGCAAGGC
CCGCTCTCGC TTAGGCCGAA GTACGTGGTT CAGTACAGAG TGTGGACGGC GCCGCCGGCA
TACGTGGCCA ATCCGCCTAA CGCCACGTGG GTGGAGAGGG GGGCCAACGT CACTGTGTCT
ATCCCCACGC CCATAGAGTC CAGGGGCAAC GTCCGCACAG TGCTCGCCCA GTGGGTCATA
AACGGGCGAC CCGCCGGCTC GCAGGTGCCG CTGGTAGTGC GGGTGGACAG ACCGCTGAAT
ATAACGTACA CCACGAAGAG GCAGTACCTC GTCTACTTCA CCTCGGCCTA CGGCCAAGTG
CCCCCACAGA TGTGGGTAGA CGAGGGCGGC GTGGCCGGCG TCGTGCCCAC GCCCATGGAC
GTCTGGTCCC CGCCGCCTTT GCACTGGGTG TTCGCCGGCT GGCGGGACAA GGCCACTGGC
ACCGTCTACA ACTATCCACA GATGCCCGTT GTCGTCGCGT CTACCACTTT TGAGGCTGTG
TGGAGCCTAG ACCCGGTCCC CCTGGTGGCT GTAGGGGGCG GGGCGGCCGG CGCCGCGTTT
CTCGTCTGGT TTATTAGGCG GAGGAGGCTG GCTAAGCTGA CGGCTGAGGT AGAGAAGCTT
TAA
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| Protein sequence | MRLLLVVLVL AAVGLAYVLP TEALDTFYWA SPGAVRVLGA DGASLFSLDA VFPLVATDAV
GKCFAVANRP YVYYTQTQGV AVTISIPTTA TLSDDLINAL RQYGVSLTSK TVPIILNLTL
PLPPVALAGV YKSTLVSLHT PYGYPLWATS LGPQVNATAV ATNCVDVAVG TMGGEVYVLR
NGKVVSKASL PSPVTALAYS RDGGALYAGT MGGEVYKVEG SSVSKVFSCP GSVLGLAVLL
DGSPVAACFS KVDVPKVYVA PYGLEFAPAV AVEYGIDTPR VPFAVSQNGE WVFVGTFGEL
VAIRRGSVAW RAPLPAPPLS VYSSGDGSIV AVGTLGGHVV VFKEGREVAR ISAGRPVTSL
AASFNGRALA YETWDSVTPV RLASVRIVPD APQQCLPVDV VVRAGEAVYA YSVSGAQDVL
VPVSKISVEP QFKYLGDVRC RPLRNVTLEV TGDLAEHVPV RYALEYRISV EPAGLVRGPA
WASGPAAFYA EPRVEIPVYN SPVSTGVLRL VGWVVDGRRL DVPTPSLTVN VDKPVSVKAV
YRVELPPYVQ INATARLRLD LVVVFDGSGN VVASGPAPEV SAYPVSAQGV YVPQALVSTS
WPASVNGSTQ LWADVGSTVV FKAPEFYDFR NGTRLAFVGW AGLEFTPEER ALEVVRTVQG
PLSLRPKYVV QYRVWTAPPA YVANPPNATW VERGANVTVS IPTPIESRGN VRTVLAQWVI
NGRPAGSQVP LVVRVDRPLN ITYTTKRQYL VYFTSAYGQV PPQMWVDEGG VAGVVPTPMD
VWSPPPLHWV FAGWRDKATG TVYNYPQMPV VVASTTFEAV WSLDPVPLVA VGGGAAGAAF
LVWFIRRRRL AKLTAEVEKL
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