Gene Pcal_0083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0083 
Symbol 
ID4909128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand+ 
Start bp81125 
End bp81688 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content64% 
IMG OID640123836 
Producthypothetical protein 
Protein accessionYP_001054989 
Protein GI126458711 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.11551 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGGGT CTATCTCCAC GTCGGCCTTG ATCCTCTTTG TGGCATTTGC GGCGACTGTG 
GCCGTGTTGG CCTACATTGT GGACATGAGG GCGCAGTGGG TGTTGGAGCG GGACGTGGAG 
TCGCTGGCCC AGTCGGCGGC GGACTTCGCC GCGTCTCAGA TTAGGGACTC GCTTGCCGCG 
GCGAGTATAC CCGGCGTAGT GGAGCTGAAC CGCTCTCTGT TGGTGCCGCG GGACTTCTAC 
GGCTTTGACA CTGCGGGCGT CTCCATATGC GTGGGGAACA GAGGCGGCTT CCTCTATGTA 
AACGTCACGG CGTCGGGGAC GAGGGGGCGG GGCTCGGCGA CGGCGAAGGC CACGGCATGG 
CTGTACAATG TGACAAAGTG GGCCATAGAC CACGGCCGGG TGGTGTACCT CGTGGGCCAG 
TACGGCCCCT GCGGCAGTCC CCCCTCCACC TGCTTCGCCA CAGTGATCGT TGGCGCGAGG 
AAGGTTGCTG TGGTCAACTT GACGCGGCCT GGCTGCTCGG CAATGCTTGT GAAGTCCGGC 
GTGTGGATAA TTCCGCGCGG CTAG
 
Protein sequence
MRGSISTSAL ILFVAFAATV AVLAYIVDMR AQWVLERDVE SLAQSAADFA ASQIRDSLAA 
ASIPGVVELN RSLLVPRDFY GFDTAGVSIC VGNRGGFLYV NVTASGTRGR GSATAKATAW 
LYNVTKWAID HGRVVYLVGQ YGPCGSPPST CFATVIVGAR KVAVVNLTRP GCSAMLVKSG 
VWIIPRG