Gene Pcal_0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0040 
Symbol 
ID4909753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand- 
Start bp44748 
End bp45293 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content54% 
IMG OID640123793 
Producthypothetical protein 
Protein accessionYP_001054946 
Protein GI126458668 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCCAAA GCTATAAAAA TATATATGTT GCAAGAGGCG TGGAAGTGCA GAAGTTGCTA 
GAGGTGAGAA AGGTCATAGA GGAGAAAATC GCCAAGCTCC AAGAGGAGTT GAAGTTCTAC 
ACCTCCCTCC TCGAGGTCAT CGACAAGGCC ATAGGCGAGA AGTCCTTCTC CACGGCGGCG 
CAAGCCGCGC GGCAGGAGAC AGAGAGACCG GAGGCGGTGG AGGAGGTGAA GGGGAGGAGC 
GGCGAAGTCT ACGCCACAGT CGAAGTGTAC AGAGACAAGC TCAGGATAAA GTTCAAAGAG 
CCGGTAAAAG TGGACGGCCT CTTCAAACGC TTCTACTTGG ACAAATTCCT GCAGAAGTAC 
AGAGAGGAAG ACGCGAGAGA GGTTAGGCAG GGGGCTCTGA GGCAGGAGGA AGCGCTGAGG 
TACGAGCTAG AGGAGCAAGA GGGCGAGGCC ACGGCGATGA CTATCTACAA CTATAGGACA 
GAGGAGAGAA AGAGGGAGAT TCTGAGAGTG CTCAGGTGGA CCCTTGAAAA AGTGTACGGC 
GGCTAG
 
Protein sequence
MLQSYKNIYV ARGVEVQKLL EVRKVIEEKI AKLQEELKFY TSLLEVIDKA IGEKSFSTAA 
QAARQETERP EAVEEVKGRS GEVYATVEVY RDKLRIKFKE PVKVDGLFKR FYLDKFLQKY 
REEDAREVRQ GALRQEEALR YELEEQEGEA TAMTIYNYRT EERKREILRV LRWTLEKVYG 
G