Gene Pcal_0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0016 
Symbol 
ID4909749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp10850 
End bp11146 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content52% 
IMG OID640123769 
Producthypothetical protein 
Protein accessionYP_001054922 
Protein GI126458644 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGCGC CCAGCGGTGA GTTTGTGTGT AAAAAATGTG GGCATAGGTG GCCTCTGCCT 
CAAGCGGACT TGACGTGGGC TGAGCTGGAG ATAAAGAAGG CGAAGCTCTT TGAGAAATAT
ATAGATGAGC CCATTGAAGA GTGTAGCGAA TTGCTCTCTA AGCTTAGGCA AGAGCTCGAT
GAAAAGAGCG CCAGGTTGCT GGCGGGGAAG ATACTGATAC AACGTGCGGA GAGGAGGAAA
CTGGCGCCGG CGGAGTTAGA GAAGTTGTAT GCAGAGGTGG AGAAGTGTTG GGGATGA
 
Protein sequence
MLAPSGEFVC KKCGHRWPLP QADLTWAELE IKKAKLFEKY IDEPIEECSE LLSKLRQELD 
EKSARLLAGK ILIQRAERRK LAPAELEKLY AEVEKCWG