Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_4311 |
Symbol | |
ID | 4176101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 5183536 |
End bp | 5184018 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638057348 |
Product | putative nucleotide-binding protein |
Protein accession | YP_663864 |
Protein GI | 109900609 |
COG category | [S] Function unknown |
COG ID | [COG1666] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.57751 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCTCAT TTGATATTGT GTCAGAAATT AAATTAGAAG AAGTGAGAAA CGCCGTCGAA AACGCTAACC GCGAGCTTTC CACCCGTTTT GACTTTCGTG GCGTAGAAGC CAGTTTCGAG CTTAAAGAAA ACATCGTTAC TATGTCTTGT GATAGTGATT TTCAGTTAAA ACAAATGCTC GATATCTTGC GCGGCACTTG TGTAAAACGC GGCGTAGATA CAGCAGCCTT TGAAGAAAAA GACGTTCAGC ACATAGGTAA GATATACAAA CAGGCTATCG CGTTTAAAGA AGGCATTGAA CAGCCTGTGG CCAAAAAGCT GATCAAGATG ATAAAAGACG CCAAGATTAA AGTGCAAGCT TCGATACAGG GCGATCAAGT GCGTGTCACG GGTAAAAAAC GTGATGATTT ACAGCAAGTC ATGGCGTTAG CGAAAAGCAG TGACCTAGAG CAACCCTTAC AATTTACCAA TTTTCGAGAT TAG
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Protein sequence | MPSFDIVSEI KLEEVRNAVE NANRELSTRF DFRGVEASFE LKENIVTMSC DSDFQLKQML DILRGTCVKR GVDTAAFEEK DVQHIGKIYK QAIAFKEGIE QPVAKKLIKM IKDAKIKVQA SIQGDQVRVT GKKRDDLQQV MALAKSSDLE QPLQFTNFRD
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