| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4300 |
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| Symbol | |
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| ID | 4176090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 5172862 |
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| End bp | 5173110 |
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| Gene Length | 249 bp |
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| Protein Length | 82 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638057337 |
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| Product | F0F1 ATP synthase subunit C |
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| Protein accession | YP_663853 |
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| Protein GI | 109900598 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0636] F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K |
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| TIGRFAM ID | [TIGR01260] ATP synthase, F0 subunit c |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00293753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAATCT TAGGAAATCT TTATATCGCG GTTGGTATTT TGATAGGACT ATGCGCATTG
GGCCCAGCGA TCGGTTTCGG TCTTCTAGGT GGTAAATTTC TTGAGTCAGC TGCTCGTCAA
CCTGAGCTAG CGCCTCAACT ACAAGTTAAA ATGTTCATTG TTGCTGGTCT TATCGATGCA
ATCGCAATGA TCGGTGTTGC TATCGCTCTT TTCTTATTGT TCGTTGAAAG CGCGAAGTTT
GCTGTTTAA
|
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| Protein sequence | MEILGNLYIA VGILIGLCAL GPAIGFGLLG GKFLESAARQ PELAPQLQVK MFIVAGLIDA
IAMIGVAIAL FLLFVESAKF AV
|
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